Gene : Glyma.08G116100 G. max Wm82.a2.v1
Defline:  (1 of 25) PF04852 - Protein of unknown function (DUF640) (DUF640) Genomic Order:  1161
Name:  ? Glyma.08G116100 Secondary Identifier:  ? PAC:30539787
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G116100 0.5kb upstream 0.5kb upstream 5118 true Chr08: 8918928-8924045 Glycine max
Glyma.08G116100 0.5kb upstream 0.5kb upstream 500 false Chr08: 8918928-8919427 Glycine max
Glyma.08G116100 0.5kb downstream 0.5kb downstream 5118 true Chr08: 8919428-8924545 Glycine max
Glyma.08G116100 0.5kb downstream 0.5kb downstream 500 false Chr08: 8924046-8924545 Glycine max
Glyma.08G116100 1.0kb upstream 1.0kb upstream 5618 true Chr08: 8918428-8924045 Glycine max
Glyma.08G116100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8918428-8919427 Glycine max
Glyma.08G116100 1.0kb downstream 1.0kb downstream 5618 true Chr08: 8919428-8925045 Glycine max
Glyma.08G116100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8924046-8925045 Glycine max
Glyma.08G116100 2.0kb upstream 2.0kb upstream 6618 true Chr08: 8917428-8924045 Glycine max
Glyma.08G116100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8917428-8919427 Glycine max
Glyma.08G116100 2.0kb downstream 2.0kb downstream 6618 true Chr08: 8919428-8926045 Glycine max
Glyma.08G116100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8924046-8926045 Glycine max
Glyma.08G116100 5.0kb upstream 5.0kb upstream 9618 true Chr08: 8914428-8924045 Glycine max
Glyma.08G116100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8914428-8919427 Glycine max
Glyma.08G116100 5.0kb downstream 5.0kb downstream 9618 true Chr08: 8919428-8929045 Glycine max
Glyma.08G116100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8924046-8929045 Glycine max
Glyma.08G116100 10.0kb upstream 10.0kb upstream 14618 true Chr08: 8909428-8924045 Glycine max
Glyma.08G116100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8909428-8919427 Glycine max
Glyma.08G116100 10.0kb downstream 10.0kb downstream 14618 true Chr08: 8919428-8934045 Glycine max
Glyma.08G116100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8924046-8934045 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792183 5273 Angiosperm View MSA
122254011 5265 Fabidae View MSA
124074351 5270 Rosid View MSA
123750207 5271 Pentapetalae View MSA
122796804 5272 Eudicot View MSA
121063429 5274 Embryophyte View MSA
123103178 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0557383 0.0 0.230709 Low Low
cufflinks 1.23302 0.0 4.42296    
cufflinks 0.740569 0.0 2.73736    
cufflinks 13.4341 0.0 36.6976   High
cufflinks 1.45481 0.0 5.15698    
cufflinks 0.172317 0.0 0.678946 Low  
cufflinks 0.226772 0.0 0.88445    
cufflinks 37.9363 0.0 101.89 High High
cufflinks 2.13729 0.0 7.31655    
cufflinks 1.439       High
cufflinks 1.455       High
cufflinks 0.61        
cufflinks 0.022     Low Low
cufflinks 0.037     Low  
cufflinks 0.113        
cufflinks 0.114        
cufflinks 0.741        
cufflinks 0.254        
cufflinks 0.019     Low Low
cufflinks 0.074     Low  
cufflinks 2.279       High
cufflinks 0.081     Low  
cufflinks 0.011     Low Low
cufflinks 0.699        
cufflinks 0.162        
cufflinks 0.488        

0 Strain