Gene : Glyma.08G116700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31314:SF10 - HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED Genomic Order:  1167
Name:  ? Glyma.08G116700 Secondary Identifier:  ? PAC:30541196
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G116700 0.5kb upstream 0.5kb upstream 6554 true Chr08: 8997012-9003565 Glycine max
Glyma.08G116700 0.5kb upstream 0.5kb upstream 500 false Chr08: 8997012-8997511 Glycine max
Glyma.08G116700 0.5kb downstream 0.5kb downstream 6554 true Chr08: 8997512-9004065 Glycine max
Glyma.08G116700 0.5kb downstream 0.5kb downstream 500 false Chr08: 9003566-9004065 Glycine max
Glyma.08G116700 1.0kb upstream 1.0kb upstream 7054 true Chr08: 8996512-9003565 Glycine max
Glyma.08G116700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8996512-8997511 Glycine max
Glyma.08G116700 1.0kb downstream 1.0kb downstream 7054 true Chr08: 8997512-9004565 Glycine max
Glyma.08G116700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9003566-9004565 Glycine max
Glyma.08G116700 2.0kb upstream 2.0kb upstream 8054 true Chr08: 8995512-9003565 Glycine max
Glyma.08G116700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8995512-8997511 Glycine max
Glyma.08G116700 2.0kb downstream 2.0kb downstream 8054 true Chr08: 8997512-9005565 Glycine max
Glyma.08G116700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9003566-9005565 Glycine max
Glyma.08G116700 5.0kb upstream 5.0kb upstream 11054 true Chr08: 8992512-9003565 Glycine max
Glyma.08G116700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8992512-8997511 Glycine max
Glyma.08G116700 5.0kb downstream 5.0kb downstream 11054 true Chr08: 8997512-9008565 Glycine max
Glyma.08G116700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9003566-9008565 Glycine max
Glyma.08G116700 10.0kb upstream 10.0kb upstream 16054 true Chr08: 8987512-9003565 Glycine max
Glyma.08G116700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8987512-8997511 Glycine max
Glyma.08G116700 10.0kb downstream 10.0kb downstream 16054 true Chr08: 8997512-9013565 Glycine max
Glyma.08G116700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9003566-9013565 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307090 5265 Fabidae View MSA
124071619 5270 Rosid View MSA
123753630 5271 Pentapetalae View MSA
122795386 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.213583 0.0 0.806326 Low Low
cufflinks 4.52879 0.0 12.6515   High
cufflinks 0.648222 0.0 2.29015    
cufflinks 0.415748 0.0 1.51622    
cufflinks 1.59218 0.0 5.12247    
cufflinks 1.70879 0.0 5.42898    
cufflinks 0.192931 0.0 0.732646 Low Low
cufflinks 0.279315 0.0 1.04048    
cufflinks 3.45615 0.0 9.95821   High
cufflinks 0.228       Low
cufflinks 1.238        
cufflinks 0.426        
cufflinks 1.855       High
cufflinks 0.623        
cufflinks 0.333        
cufflinks 0.619        
cufflinks 0.59        
cufflinks 0.269       Low
cufflinks 3.961       High
cufflinks 0.35        
cufflinks 1.409        
cufflinks 0.532        
cufflinks 0.492        
cufflinks 2.638       High
cufflinks 0.484        
cufflinks 1.262        

0 Strain