Gene : Glyma.08G118000 G. max Wm82.a2.v1
Defline:  (1 of 15) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Genomic Order:  1180
Name:  ? Glyma.08G118000 Secondary Identifier:  ? PAC:30539444
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G118000 0.5kb upstream 0.5kb upstream 2712 true Chr08: 9100408-9103119 Glycine max
Glyma.08G118000 0.5kb upstream 0.5kb upstream 500 false Chr08: 9102620-9103119 Glycine max
Glyma.08G118000 0.5kb downstream 0.5kb downstream 2712 true Chr08: 9099908-9102619 Glycine max
Glyma.08G118000 0.5kb downstream 0.5kb downstream 500 false Chr08: 9099908-9100407 Glycine max
Glyma.08G118000 1.0kb upstream 1.0kb upstream 3212 true Chr08: 9100408-9103619 Glycine max
Glyma.08G118000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9102620-9103619 Glycine max
Glyma.08G118000 1.0kb downstream 1.0kb downstream 3212 true Chr08: 9099408-9102619 Glycine max
Glyma.08G118000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9099408-9100407 Glycine max
Glyma.08G118000 2.0kb upstream 2.0kb upstream 4212 true Chr08: 9100408-9104619 Glycine max
Glyma.08G118000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9102620-9104619 Glycine max
Glyma.08G118000 2.0kb downstream 2.0kb downstream 4212 true Chr08: 9098408-9102619 Glycine max
Glyma.08G118000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9098408-9100407 Glycine max
Glyma.08G118000 5.0kb upstream 5.0kb upstream 7212 true Chr08: 9100408-9107619 Glycine max
Glyma.08G118000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9102620-9107619 Glycine max
Glyma.08G118000 5.0kb downstream 5.0kb downstream 7212 true Chr08: 9095408-9102619 Glycine max
Glyma.08G118000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9095408-9100407 Glycine max
Glyma.08G118000 10.0kb upstream 10.0kb upstream 12212 true Chr08: 9100408-9112619 Glycine max
Glyma.08G118000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9102620-9112619 Glycine max
Glyma.08G118000 10.0kb downstream 10.0kb downstream 12212 true Chr08: 9090408-9102619 Glycine max
Glyma.08G118000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9090408-9100407 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309293 5265 Fabidae View MSA
124069452 5270 Rosid View MSA
123750929 5271 Pentapetalae View MSA
122791685 5272 Eudicot View MSA
122049141 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.23452 0.0 4.23724    
cufflinks 1.16794 0.0 4.01725    
cufflinks 3.16537 0.0 9.50063   High
cufflinks 0.820594 0.0 2.90572    
cufflinks 0.760864 0.0 2.72217    
cufflinks 1.80348 0.0 5.90689    
cufflinks 2.42933 0.0 7.64829   High
cufflinks 0.412086 0.0 1.52489   Low
cufflinks 0.845992 0.0 2.99587    
cufflinks 5.741        
cufflinks 13.947     High  
cufflinks 4.681        
cufflinks 1.925        
cufflinks 0.889       Low
cufflinks 53.195     High High
cufflinks 2.41        
cufflinks 44.252     High High
cufflinks 5.606        
cufflinks 1.862        
cufflinks 1.873        
cufflinks 14.857     High  
cufflinks 1.691        
cufflinks 5.777        
cufflinks 8.549     High  
cufflinks 1.724        
cufflinks 32.562     High High

0 Strain