Gene : Glyma.08G119100 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11145 - TUMOR NECROSIS FACTOR-RELATED Genomic Order:  1191
Name:  ? Glyma.08G119100 Secondary Identifier:  ? PAC:30538324
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G119100 0.5kb upstream 0.5kb upstream 2594 true Chr08: 9187407-9190000 Glycine max
Glyma.08G119100 0.5kb upstream 0.5kb upstream 500 false Chr08: 9187407-9187906 Glycine max
Glyma.08G119100 0.5kb downstream 0.5kb downstream 2594 true Chr08: 9187907-9190500 Glycine max
Glyma.08G119100 0.5kb downstream 0.5kb downstream 500 false Chr08: 9190001-9190500 Glycine max
Glyma.08G119100 1.0kb upstream 1.0kb upstream 3094 true Chr08: 9186907-9190000 Glycine max
Glyma.08G119100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9186907-9187906 Glycine max
Glyma.08G119100 1.0kb downstream 1.0kb downstream 3094 true Chr08: 9187907-9191000 Glycine max
Glyma.08G119100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9190001-9191000 Glycine max
Glyma.08G119100 2.0kb upstream 2.0kb upstream 4094 true Chr08: 9185907-9190000 Glycine max
Glyma.08G119100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9185907-9187906 Glycine max
Glyma.08G119100 2.0kb downstream 2.0kb downstream 4094 true Chr08: 9187907-9192000 Glycine max
Glyma.08G119100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9190001-9192000 Glycine max
Glyma.08G119100 5.0kb upstream 5.0kb upstream 7094 true Chr08: 9182907-9190000 Glycine max
Glyma.08G119100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9182907-9187906 Glycine max
Glyma.08G119100 5.0kb downstream 5.0kb downstream 7094 true Chr08: 9187907-9195000 Glycine max
Glyma.08G119100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9190001-9195000 Glycine max
Glyma.08G119100 10.0kb upstream 10.0kb upstream 12094 true Chr08: 9177907-9190000 Glycine max
Glyma.08G119100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9177907-9187906 Glycine max
Glyma.08G119100 10.0kb downstream 10.0kb downstream 12094 true Chr08: 9187907-9200000 Glycine max
Glyma.08G119100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9190001-9200000 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304372 5265 Fabidae View MSA
124065246 5270 Rosid View MSA
123739700 5271 Pentapetalae View MSA
122793566 5272 Eudicot View MSA
122045372 5273 Angiosperm View MSA
121348328 5274 Embryophyte View MSA
123380822 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.6119 0.0 36.3219   High
cufflinks 3.97382 0.0 11.5814   Low
cufflinks 11.3034 0.0 30.3145    
cufflinks 7.07481 0.0 19.4192    
cufflinks 8.27773 0.0 22.3903    
cufflinks 11.4796 0.0 30.7045    
cufflinks 6.65577 0.0 18.2992    
cufflinks 8.19444 0.0 22.2618    
cufflinks 7.36052 0.0 20.0977    
cufflinks 5.951        
cufflinks 18.391     High High
cufflinks 10.451     High  
cufflinks 5.547        
cufflinks 4.729        
cufflinks 8.982     High  
cufflinks 6.174        
cufflinks 30.188     High High
cufflinks 6.928        
cufflinks 4.104       Low
cufflinks 5.57        
cufflinks 17.654     High High
cufflinks 5.804        
cufflinks 4.306       Low
cufflinks 18.236     High High
cufflinks 4.965        
cufflinks 20.24     High High

0 Strain