Gene : Glyma.08G119400 G. max Wm82.a2.v1
Defline:  (1 of 35) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  1194
Name:  ? Glyma.08G119400 Secondary Identifier:  ? PAC:30536366
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G119400 0.5kb upstream 0.5kb upstream 1346 true Chr08: 9206412-9207757 Glycine max
Glyma.08G119400 0.5kb upstream 0.5kb upstream 500 false Chr08: 9206412-9206911 Glycine max
Glyma.08G119400 0.5kb downstream 0.5kb downstream 1346 true Chr08: 9206912-9208257 Glycine max
Glyma.08G119400 0.5kb downstream 0.5kb downstream 500 false Chr08: 9207758-9208257 Glycine max
Glyma.08G119400 1.0kb upstream 1.0kb upstream 1846 true Chr08: 9205912-9207757 Glycine max
Glyma.08G119400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9205912-9206911 Glycine max
Glyma.08G119400 1.0kb downstream 1.0kb downstream 1846 true Chr08: 9206912-9208757 Glycine max
Glyma.08G119400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9207758-9208757 Glycine max
Glyma.08G119400 2.0kb upstream 2.0kb upstream 2846 true Chr08: 9204912-9207757 Glycine max
Glyma.08G119400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9204912-9206911 Glycine max
Glyma.08G119400 2.0kb downstream 2.0kb downstream 2846 true Chr08: 9206912-9209757 Glycine max
Glyma.08G119400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9207758-9209757 Glycine max
Glyma.08G119400 5.0kb upstream 5.0kb upstream 5846 true Chr08: 9201912-9207757 Glycine max
Glyma.08G119400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9201912-9206911 Glycine max
Glyma.08G119400 5.0kb downstream 5.0kb downstream 5846 true Chr08: 9206912-9212757 Glycine max
Glyma.08G119400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9207758-9212757 Glycine max
Glyma.08G119400 10.0kb upstream 10.0kb upstream 10846 true Chr08: 9196912-9207757 Glycine max
Glyma.08G119400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9196912-9206911 Glycine max
Glyma.08G119400 10.0kb downstream 10.0kb downstream 10846 true Chr08: 9206912-9217757 Glycine max
Glyma.08G119400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9207758-9217757 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314337 5265 Fabidae View MSA
124062228 5270 Rosid View MSA
123750165 5271 Pentapetalae View MSA
122791630 5272 Eudicot View MSA
122047379 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.21082 0.0 0.83861 Low  
cufflinks 0.0604474 0.0 0.257254 Low  
cufflinks 0.0369801 0.0 0.163685 Low  
cufflinks 0.0173238 0.0 0.08249 Low Low
cufflinks 1.28685 0.0 4.73469    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0256165 0.0 0.117329 Low  
cufflinks 8.59217 0.0 25.8848   High
cufflinks 1.29408 0.0 4.75985    
cufflinks 1.756       High
cufflinks 0.635        
cufflinks 0.02     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 3.057       High
cufflinks 0.012     Low Low
cufflinks 0.036     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.749        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.872        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.403        

0 Strain