Gene : Glyma.08G121000 G. max Wm82.a2.v1

Defline:  (1 of 5) 3.2.2.27 - Uracil-DNA glycosylase / Uracil-DNA N-glycosylase Genomic Order:  1211
Name:  ? Glyma.08G121000 Secondary Identifier:  ? PAC:30538979

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G121000 0.5kb upstream 0.5kb upstream 3378 true Chr08: 9348952-9352329 Glycine max
Glyma.08G121000 0.5kb upstream 0.5kb upstream 500 false Chr08: 9351830-9352329 Glycine max
Glyma.08G121000 0.5kb downstream 0.5kb downstream 3378 true Chr08: 9348452-9351829 Glycine max
Glyma.08G121000 0.5kb downstream 0.5kb downstream 500 false Chr08: 9348452-9348951 Glycine max
Glyma.08G121000 1.0kb upstream 1.0kb upstream 3878 true Chr08: 9348952-9352829 Glycine max
Glyma.08G121000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9351830-9352829 Glycine max
Glyma.08G121000 1.0kb downstream 1.0kb downstream 3878 true Chr08: 9347952-9351829 Glycine max
Glyma.08G121000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9347952-9348951 Glycine max
Glyma.08G121000 2.0kb upstream 2.0kb upstream 4878 true Chr08: 9348952-9353829 Glycine max
Glyma.08G121000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9351830-9353829 Glycine max
Glyma.08G121000 2.0kb downstream 2.0kb downstream 4878 true Chr08: 9346952-9351829 Glycine max
Glyma.08G121000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9346952-9348951 Glycine max
Glyma.08G121000 5.0kb upstream 5.0kb upstream 7878 true Chr08: 9348952-9356829 Glycine max
Glyma.08G121000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9351830-9356829 Glycine max
Glyma.08G121000 5.0kb downstream 5.0kb downstream 7878 true Chr08: 9343952-9351829 Glycine max
Glyma.08G121000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9343952-9348951 Glycine max
Glyma.08G121000 10.0kb upstream 10.0kb upstream 12878 true Chr08: 9348952-9361829 Glycine max
Glyma.08G121000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9351830-9361829 Glycine max
Glyma.08G121000 10.0kb downstream 10.0kb downstream 12878 true Chr08: 9338952-9351829 Glycine max
Glyma.08G121000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9338952-9348951 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121608336 5273 Angiosperm Singleton cluster - no MSA
122240084 5265 Fabidae Singleton cluster - no MSA
123985211 5270 Rosid Singleton cluster - no MSA
123560656 5271 Pentapetalae Singleton cluster - no MSA
122595453 5272 Eudicot Singleton cluster - no MSA
120880608 5274 Embryophyte Singleton cluster - no MSA
123426382 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.314212 0.0 5.1801   High
cufflinks 0.0621225 0.0 2.07976 Low  
cufflinks 0.026647 0.0 1.7402 Low Low
cufflinks 0.020811 0.0 1.14341 Low Low
cufflinks 0.138368 0.0 2.48075 Low  
cufflinks 0.0647957 0.0 2.33479 Low  
cufflinks 0.0481769 0.0 2.05342 Low  
cufflinks 0.245419 0.0 4.04924 Low High
cufflinks 0.035     Low  
cufflinks 0.006     Low Low
cufflinks 0.097     Low  
cufflinks 0.017     Low  
cufflinks 0.08        
cufflinks 0.058        
cufflinks 0.162        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.096     Low  
cufflinks 0.299       High
cufflinks 0.051     Low  
cufflinks 0.006     Low Low
cufflinks 0.154        
cufflinks 0.253       High
cufflinks 0.013     Low Low
cufflinks 0.063     Low  
cufflinks 0.023     Low  

0 Strain