Gene : Glyma.08G121700 G. max Wm82.a2.v1
Defline:  (1 of 23) 3.2.1.78 - Mannan endo-1,4-beta-mannosidase / Endo-1,4-mannanase Genomic Order:  1217
Name:  ? Glyma.08G121700 Secondary Identifier:  ? PAC:30541399
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G121700 0.5kb upstream 0.5kb upstream 1785 true Chr08: 9382901-9384685 Glycine max
Glyma.08G121700 0.5kb upstream 0.5kb upstream 500 false Chr08: 9384186-9384685 Glycine max
Glyma.08G121700 0.5kb downstream 0.5kb downstream 1785 true Chr08: 9382401-9384185 Glycine max
Glyma.08G121700 0.5kb downstream 0.5kb downstream 500 false Chr08: 9382401-9382900 Glycine max
Glyma.08G121700 1.0kb upstream 1.0kb upstream 2285 true Chr08: 9382901-9385185 Glycine max
Glyma.08G121700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9384186-9385185 Glycine max
Glyma.08G121700 1.0kb downstream 1.0kb downstream 2285 true Chr08: 9381901-9384185 Glycine max
Glyma.08G121700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9381901-9382900 Glycine max
Glyma.08G121700 2.0kb upstream 2.0kb upstream 3285 true Chr08: 9382901-9386185 Glycine max
Glyma.08G121700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9384186-9386185 Glycine max
Glyma.08G121700 2.0kb downstream 2.0kb downstream 3285 true Chr08: 9380901-9384185 Glycine max
Glyma.08G121700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9380901-9382900 Glycine max
Glyma.08G121700 5.0kb upstream 5.0kb upstream 6285 true Chr08: 9382901-9389185 Glycine max
Glyma.08G121700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9384186-9389185 Glycine max
Glyma.08G121700 5.0kb downstream 5.0kb downstream 6285 true Chr08: 9377901-9384185 Glycine max
Glyma.08G121700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9377901-9382900 Glycine max
Glyma.08G121700 10.0kb upstream 10.0kb upstream 11285 true Chr08: 9382901-9394185 Glycine max
Glyma.08G121700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9384186-9394185 Glycine max
Glyma.08G121700 10.0kb downstream 10.0kb downstream 11285 true Chr08: 9372901-9384185 Glycine max
Glyma.08G121700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9372901-9382900 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310480 5265 Fabidae View MSA
124067384 5270 Rosid View MSA
123740214 5271 Pentapetalae View MSA
122788901 5272 Eudicot View MSA
122050396 5273 Angiosperm View MSA
121349282 5274 Embryophyte View MSA
123381254 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.219298 0.0 0.868733   Low
cufflinks 0.97853 0.0 3.63906    
cufflinks 0.897227 0.0 3.34769    
cufflinks 0.760055 0.0 2.85852    
cufflinks 5.40314 0.0 17.3297    
cufflinks 6.29184 0.0 19.6782   High
cufflinks 0.14495 0.0 0.583349 Low Low
cufflinks 1.01799 0.0 3.77679    
cufflinks 10.4142 0.0 30.3667   High
cufflinks 4.703        
cufflinks 4.022        
cufflinks 1.085        
cufflinks 15.072     High High
cufflinks 4.3        
cufflinks 0.193       Low
cufflinks 1.376        
cufflinks 5.563        
cufflinks 2.949        
cufflinks 0.477       Low
cufflinks 2.073        
cufflinks 6.087     High  
cufflinks 1.662        
cufflinks 1.019        
cufflinks 2.742        
cufflinks 1.794        
cufflinks 6.019        

0 Strain