Gene : Glyma.08G122700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12758:SF20 - PEPTIDASE-C1 DOMAIN-CONTAINING PROTEIN Genomic Order:  1227
Name:  ? Glyma.08G122700 Secondary Identifier:  ? PAC:30536301
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G122700 0.5kb upstream 0.5kb upstream 6829 true Chr08: 9452104-9458932 Glycine max
Glyma.08G122700 0.5kb upstream 0.5kb upstream 500 false Chr08: 9452104-9452603 Glycine max
Glyma.08G122700 0.5kb downstream 0.5kb downstream 6829 true Chr08: 9452604-9459432 Glycine max
Glyma.08G122700 0.5kb downstream 0.5kb downstream 500 false Chr08: 9458933-9459432 Glycine max
Glyma.08G122700 1.0kb upstream 1.0kb upstream 7329 true Chr08: 9451604-9458932 Glycine max
Glyma.08G122700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9451604-9452603 Glycine max
Glyma.08G122700 1.0kb downstream 1.0kb downstream 7329 true Chr08: 9452604-9459932 Glycine max
Glyma.08G122700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9458933-9459932 Glycine max
Glyma.08G122700 2.0kb upstream 2.0kb upstream 8329 true Chr08: 9450604-9458932 Glycine max
Glyma.08G122700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9450604-9452603 Glycine max
Glyma.08G122700 2.0kb downstream 2.0kb downstream 8329 true Chr08: 9452604-9460932 Glycine max
Glyma.08G122700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9458933-9460932 Glycine max
Glyma.08G122700 5.0kb upstream 5.0kb upstream 11329 true Chr08: 9447604-9458932 Glycine max
Glyma.08G122700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9447604-9452603 Glycine max
Glyma.08G122700 5.0kb downstream 5.0kb downstream 11329 true Chr08: 9452604-9463932 Glycine max
Glyma.08G122700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9458933-9463932 Glycine max
Glyma.08G122700 10.0kb upstream 10.0kb upstream 16329 true Chr08: 9442604-9458932 Glycine max
Glyma.08G122700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9442604-9452603 Glycine max
Glyma.08G122700 10.0kb downstream 10.0kb downstream 16329 true Chr08: 9452604-9468932 Glycine max
Glyma.08G122700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9458933-9468932 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300528 5265 Fabidae View MSA
124065428 5270 Rosid View MSA
123746895 5271 Pentapetalae View MSA
122790736 5272 Eudicot View MSA
122047754 5273 Angiosperm View MSA
121350111 5274 Embryophyte View MSA
123424635 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.0976 0.0 102.537 High  
cufflinks 26.7582 0.0 101.986 High  
cufflinks 30.6589 0.0 104.887 High  
cufflinks 24.5157 0.0 92.1417 High  
cufflinks 29.4204 0.0 100.027 High  
cufflinks 18.197 0.0 64.6361   Low
cufflinks 50.8171 0.0 204.487 High High
cufflinks 24.2934 0.0 91.0549 High  
cufflinks 22.9496 0.0 84.8467 High  
cufflinks 4.367       Low
cufflinks 6.069     High  
cufflinks 6.843       High
cufflinks 5.593        
cufflinks 6.814     High High
cufflinks 5.481     High  
cufflinks 5.54        
cufflinks 4.333       Low
cufflinks 6.45        
cufflinks 7.255       High
cufflinks 6.398        
cufflinks 5.416        
cufflinks 6.171        
cufflinks 4.472       Low
cufflinks 5.851        
cufflinks 5.718        
cufflinks 5.544        

0 Strain