Gene : Glyma.08G123100 G. max Wm82.a2.v1
Defline:  (1 of 52) PTHR11353 - CHAPERONIN Genomic Order:  1231
Name:  ? Glyma.08G123100 Secondary Identifier:  ? PAC:30535743
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G123100 0.5kb upstream 0.5kb upstream 8135 true Chr08: 9468076-9476210 Glycine max
Glyma.08G123100 0.5kb upstream 0.5kb upstream 500 false Chr08: 9475711-9476210 Glycine max
Glyma.08G123100 0.5kb downstream 0.5kb downstream 8135 true Chr08: 9467576-9475710 Glycine max
Glyma.08G123100 0.5kb downstream 0.5kb downstream 500 false Chr08: 9467576-9468075 Glycine max
Glyma.08G123100 1.0kb upstream 1.0kb upstream 8635 true Chr08: 9468076-9476710 Glycine max
Glyma.08G123100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9475711-9476710 Glycine max
Glyma.08G123100 1.0kb downstream 1.0kb downstream 8635 true Chr08: 9467076-9475710 Glycine max
Glyma.08G123100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9467076-9468075 Glycine max
Glyma.08G123100 2.0kb upstream 2.0kb upstream 9635 true Chr08: 9468076-9477710 Glycine max
Glyma.08G123100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9475711-9477710 Glycine max
Glyma.08G123100 2.0kb downstream 2.0kb downstream 9635 true Chr08: 9466076-9475710 Glycine max
Glyma.08G123100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9466076-9468075 Glycine max
Glyma.08G123100 5.0kb upstream 5.0kb upstream 12635 true Chr08: 9468076-9480710 Glycine max
Glyma.08G123100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9475711-9480710 Glycine max
Glyma.08G123100 5.0kb downstream 5.0kb downstream 12635 true Chr08: 9463076-9475710 Glycine max
Glyma.08G123100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9463076-9468075 Glycine max
Glyma.08G123100 10.0kb upstream 10.0kb upstream 17635 true Chr08: 9468076-9485710 Glycine max
Glyma.08G123100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9475711-9485710 Glycine max
Glyma.08G123100 10.0kb downstream 10.0kb downstream 17635 true Chr08: 9458076-9475710 Glycine max
Glyma.08G123100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9458076-9468075 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308396 5265 Fabidae View MSA
124067300 5270 Rosid View MSA
123737840 5271 Pentapetalae View MSA
122792769 5272 Eudicot View MSA
122046551 5273 Angiosperm View MSA
121345633 5274 Embryophyte View MSA
123423902 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.8133 0.0 64.4836 High  
cufflinks 42.7512 0.0 122.014 High  
cufflinks 16.0533 0.0 42.8752   Low
cufflinks 35.2924 0.0 98.6697 High  
cufflinks 55.9948 0.0 166.058 High High
cufflinks 29.8444 0.0 82.0874 High  
cufflinks 52.6135 0.0 154.419 High High
cufflinks 37.6686 0.0 105.991 High  
cufflinks 39.1661 0.0 110.674 High  
cufflinks 7.896     High  
cufflinks 1.336       Low
cufflinks 6.391        
cufflinks 15.866     High High
cufflinks 21.626     High High
cufflinks 2.244       Low
cufflinks 7.979     High  
cufflinks 3.867        
cufflinks 7.381     High  
cufflinks 11.484     High  
cufflinks 6.413        
cufflinks 2.687       Low
cufflinks 6.832        
cufflinks 9.048     High  
cufflinks 1.864       Low
cufflinks 7.293     High  
cufflinks 4.1        

0 Strain