Gene : Glyma.08G111500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22629 - ARP2/3 COMPLEX 20 KD SUBUNIT Genomic Order:  1115
Name:  ? Glyma.08G111500 Secondary Identifier:  ? PAC:30540825
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G111500 0.5kb upstream 0.5kb upstream 6925 true Chr08: 8590409-8597333 Glycine max
Glyma.08G111500 0.5kb upstream 0.5kb upstream 500 false Chr08: 8596834-8597333 Glycine max
Glyma.08G111500 0.5kb downstream 0.5kb downstream 6925 true Chr08: 8589909-8596833 Glycine max
Glyma.08G111500 0.5kb downstream 0.5kb downstream 500 false Chr08: 8589909-8590408 Glycine max
Glyma.08G111500 1.0kb upstream 1.0kb upstream 7425 true Chr08: 8590409-8597833 Glycine max
Glyma.08G111500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8596834-8597833 Glycine max
Glyma.08G111500 1.0kb downstream 1.0kb downstream 7425 true Chr08: 8589409-8596833 Glycine max
Glyma.08G111500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8589409-8590408 Glycine max
Glyma.08G111500 2.0kb upstream 2.0kb upstream 8425 true Chr08: 8590409-8598833 Glycine max
Glyma.08G111500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8596834-8598833 Glycine max
Glyma.08G111500 2.0kb downstream 2.0kb downstream 8425 true Chr08: 8588409-8596833 Glycine max
Glyma.08G111500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8588409-8590408 Glycine max
Glyma.08G111500 5.0kb upstream 5.0kb upstream 11425 true Chr08: 8590409-8601833 Glycine max
Glyma.08G111500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8596834-8601833 Glycine max
Glyma.08G111500 5.0kb downstream 5.0kb downstream 11425 true Chr08: 8585409-8596833 Glycine max
Glyma.08G111500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8585409-8590408 Glycine max
Glyma.08G111500 10.0kb upstream 10.0kb upstream 16425 true Chr08: 8590409-8606833 Glycine max
Glyma.08G111500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8596834-8606833 Glycine max
Glyma.08G111500 10.0kb downstream 10.0kb downstream 16425 true Chr08: 8580409-8596833 Glycine max
Glyma.08G111500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8580409-8590408 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310777 5265 Fabidae View MSA
124070317 5270 Rosid View MSA
123743957 5271 Pentapetalae View MSA
122793284 5272 Eudicot View MSA
122047999 5273 Angiosperm View MSA
121345862 5274 Embryophyte View MSA
123425617 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.98164 0.0 15.627    
cufflinks 8.5259 0.0 24.8165    
cufflinks 3.32396 0.0 11.0105   Low
cufflinks 9.62262 0.0 27.5331    
cufflinks 6.78203 0.0 20.323    
cufflinks 5.62521 0.0 17.3274    
cufflinks 11.8964 0.0 33.3991   High
cufflinks 7.43809 0.0 22.0092    
cufflinks 7.67525 0.0 22.6293    
cufflinks 0.717        
cufflinks 0.41       Low
cufflinks 0.905        
cufflinks 1.255        
cufflinks 1.525       High
cufflinks 0.95        
cufflinks 1.012        
cufflinks 0.461       Low
cufflinks 1.161        
cufflinks 1.286       High
cufflinks 0.907        
cufflinks 0.517       Low
cufflinks 1.034        
cufflinks 1.036        
cufflinks 0.501       Low
cufflinks 1.101        
cufflinks 0.486       Low

0 Strain