Gene : Glyma.08G111600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22957//PTHR22957:SF329 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN Genomic Order:  1116
Name:  ? Glyma.08G111600 Secondary Identifier:  ? PAC:30540625
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G111600 0.5kb upstream 0.5kb upstream 5517 true Chr08: 8598141-8603657 Glycine max
Glyma.08G111600 0.5kb upstream 0.5kb upstream 500 false Chr08: 8603158-8603657 Glycine max
Glyma.08G111600 0.5kb downstream 0.5kb downstream 5517 true Chr08: 8597641-8603157 Glycine max
Glyma.08G111600 0.5kb downstream 0.5kb downstream 500 false Chr08: 8597641-8598140 Glycine max
Glyma.08G111600 1.0kb upstream 1.0kb upstream 6017 true Chr08: 8598141-8604157 Glycine max
Glyma.08G111600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8603158-8604157 Glycine max
Glyma.08G111600 1.0kb downstream 1.0kb downstream 6017 true Chr08: 8597141-8603157 Glycine max
Glyma.08G111600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8597141-8598140 Glycine max
Glyma.08G111600 2.0kb upstream 2.0kb upstream 7017 true Chr08: 8598141-8605157 Glycine max
Glyma.08G111600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8603158-8605157 Glycine max
Glyma.08G111600 2.0kb downstream 2.0kb downstream 7017 true Chr08: 8596141-8603157 Glycine max
Glyma.08G111600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8596141-8598140 Glycine max
Glyma.08G111600 5.0kb upstream 5.0kb upstream 10017 true Chr08: 8598141-8608157 Glycine max
Glyma.08G111600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8603158-8608157 Glycine max
Glyma.08G111600 5.0kb downstream 5.0kb downstream 10017 true Chr08: 8593141-8603157 Glycine max
Glyma.08G111600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8593141-8598140 Glycine max
Glyma.08G111600 10.0kb upstream 10.0kb upstream 15017 true Chr08: 8598141-8613157 Glycine max
Glyma.08G111600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8603158-8613157 Glycine max
Glyma.08G111600 10.0kb downstream 10.0kb downstream 15017 true Chr08: 8588141-8603157 Glycine max
Glyma.08G111600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8588141-8598140 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301708 5265 Fabidae View MSA
124070393 5270 Rosid View MSA
123742752 5271 Pentapetalae View MSA
122794560 5272 Eudicot View MSA
122050353 5273 Angiosperm View MSA
121347647 5274 Embryophyte View MSA
123426413 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.57133 0.0 21.0733   Low
cufflinks 11.2602 0.0 30.4692    
cufflinks 11.6625 0.0 31.5124    
cufflinks 14.7106 0.0 39.388   High
cufflinks 12.0834 0.0 32.5434    
cufflinks 8.13176 0.0 22.4732   Low
cufflinks 15.9894 0.0 42.721   High
cufflinks 12.8845 0.0 34.6444    
cufflinks 9.83304 0.0 26.7938    
cufflinks 3.33        
cufflinks 1.819       Low
cufflinks 3.345        
cufflinks 3.043        
cufflinks 3.316        
cufflinks 2.228        
cufflinks 2.921        
cufflinks 2.301        
cufflinks 3.506       High
cufflinks 4.204       High
cufflinks 2.729        
cufflinks 2.17       Low
cufflinks 2.893        
cufflinks 2.886        
cufflinks 2.305        
cufflinks 2.427        
cufflinks 2.181       Low

0 Strain