Gene : Glyma.08G112000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13020 - UBIQUITIN-ASSOCIATED UBA/UBX DOMAIN-CONTAINING Genomic Order:  1120
Name:  ? Glyma.08G112000 Secondary Identifier:  ? PAC:30537429
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G112000 0.5kb upstream 0.5kb upstream 7045 true Chr08: 8623637-8630681 Glycine max
Glyma.08G112000 0.5kb upstream 0.5kb upstream 500 false Chr08: 8623637-8624136 Glycine max
Glyma.08G112000 0.5kb downstream 0.5kb downstream 7045 true Chr08: 8624137-8631181 Glycine max
Glyma.08G112000 0.5kb downstream 0.5kb downstream 500 false Chr08: 8630682-8631181 Glycine max
Glyma.08G112000 1.0kb upstream 1.0kb upstream 7545 true Chr08: 8623137-8630681 Glycine max
Glyma.08G112000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8623137-8624136 Glycine max
Glyma.08G112000 1.0kb downstream 1.0kb downstream 7545 true Chr08: 8624137-8631681 Glycine max
Glyma.08G112000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8630682-8631681 Glycine max
Glyma.08G112000 2.0kb upstream 2.0kb upstream 8545 true Chr08: 8622137-8630681 Glycine max
Glyma.08G112000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8622137-8624136 Glycine max
Glyma.08G112000 2.0kb downstream 2.0kb downstream 8545 true Chr08: 8624137-8632681 Glycine max
Glyma.08G112000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8630682-8632681 Glycine max
Glyma.08G112000 5.0kb upstream 5.0kb upstream 11545 true Chr08: 8619137-8630681 Glycine max
Glyma.08G112000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8619137-8624136 Glycine max
Glyma.08G112000 5.0kb downstream 5.0kb downstream 11545 true Chr08: 8624137-8635681 Glycine max
Glyma.08G112000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8630682-8635681 Glycine max
Glyma.08G112000 10.0kb upstream 10.0kb upstream 16545 true Chr08: 8614137-8630681 Glycine max
Glyma.08G112000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8614137-8624136 Glycine max
Glyma.08G112000 10.0kb downstream 10.0kb downstream 16545 true Chr08: 8624137-8640681 Glycine max
Glyma.08G112000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8630682-8640681 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301757 5265 Fabidae View MSA
124061214 5270 Rosid View MSA
123738643 5271 Pentapetalae View MSA
122787724 5272 Eudicot View MSA
122045767 5273 Angiosperm View MSA
121347090 5274 Embryophyte View MSA
123424729 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.1919 0.0 51.3795    
cufflinks 17.4284 0.0 46.5512   Low
cufflinks 16.3695 0.0 43.6904   Low
cufflinks 24.0035 0.0 64.8445 High  
cufflinks 26.6707 0.0 72.5455 High  
cufflinks 30.3841 0.0 83.3308 High High
cufflinks 20.9697 0.0 56.2895    
cufflinks 24.4584 0.0 66.2152 High  
cufflinks 21.7274 0.0 58.444 High  
cufflinks 6.901        
cufflinks 4.899        
cufflinks 5.151        
cufflinks 9.139     High High
cufflinks 9.257     High High
cufflinks 3.423       Low
cufflinks 5.006        
cufflinks 6.235     High  
cufflinks 5.584        
cufflinks 5.716        
cufflinks 4.366        
cufflinks 7.213     High  
cufflinks 4.556        
cufflinks 4.604        
cufflinks 7.033     High  
cufflinks 4.545        
cufflinks 7.898     High High

0 Strain