Gene : Glyma.08G113400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11785//PTHR11785:SF359 - AMINO ACID TRANSPORTER Genomic Order:  1134
Name:  ? Glyma.08G113400 Secondary Identifier:  ? PAC:30538803
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G113400 0.5kb upstream 0.5kb upstream 2756 true Chr08: 8702839-8705594 Glycine max
Glyma.08G113400 0.5kb upstream 0.5kb upstream 500 false Chr08: 8702839-8703338 Glycine max
Glyma.08G113400 0.5kb downstream 0.5kb downstream 2756 true Chr08: 8703339-8706094 Glycine max
Glyma.08G113400 0.5kb downstream 0.5kb downstream 500 false Chr08: 8705595-8706094 Glycine max
Glyma.08G113400 1.0kb upstream 1.0kb upstream 3256 true Chr08: 8702339-8705594 Glycine max
Glyma.08G113400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8702339-8703338 Glycine max
Glyma.08G113400 1.0kb downstream 1.0kb downstream 3256 true Chr08: 8703339-8706594 Glycine max
Glyma.08G113400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8705595-8706594 Glycine max
Glyma.08G113400 2.0kb upstream 2.0kb upstream 4256 true Chr08: 8701339-8705594 Glycine max
Glyma.08G113400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8701339-8703338 Glycine max
Glyma.08G113400 2.0kb downstream 2.0kb downstream 4256 true Chr08: 8703339-8707594 Glycine max
Glyma.08G113400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8705595-8707594 Glycine max
Glyma.08G113400 5.0kb upstream 5.0kb upstream 7256 true Chr08: 8698339-8705594 Glycine max
Glyma.08G113400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8698339-8703338 Glycine max
Glyma.08G113400 5.0kb downstream 5.0kb downstream 7256 true Chr08: 8703339-8710594 Glycine max
Glyma.08G113400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8705595-8710594 Glycine max
Glyma.08G113400 10.0kb upstream 10.0kb upstream 12256 true Chr08: 8693339-8705594 Glycine max
Glyma.08G113400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8693339-8703338 Glycine max
Glyma.08G113400 10.0kb downstream 10.0kb downstream 12256 true Chr08: 8703339-8715594 Glycine max
Glyma.08G113400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8705595-8715594 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300403 5265 Fabidae View MSA
124071133 5270 Rosid View MSA
123751065 5271 Pentapetalae View MSA
122791339 5272 Eudicot View MSA
122044006 5273 Angiosperm View MSA
121310225 5274 Embryophyte View MSA
123347773 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.1314 0.0 14.6048    
cufflinks 7.81598 0.0 21.381    
cufflinks 268.18 0.0 1123.32 High High
cufflinks 6.19111 0.0 17.2481    
cufflinks 24.2052 0.0 65.1376 High  
cufflinks 226.318 0.0 892.966 High High
cufflinks 2.41983 0.0 7.61985   Low
cufflinks 20.4538 0.0 54.7722    
cufflinks 17.2343 0.0 46.0008    
cufflinks 37.622     High High
cufflinks 11.0     High  
cufflinks 87.61     High High
cufflinks 11.763     High  
cufflinks 6.77     High  
cufflinks 1.03       Low
cufflinks 3.778        
cufflinks 7.403     High  
cufflinks 16.256     High  
cufflinks 7.722     High  
cufflinks 4.569        
cufflinks 5.443        
cufflinks 5.234        
cufflinks 11.429     High  
cufflinks 18.46     High  
cufflinks 3.992        
cufflinks 4.73        

0 Strain