Gene : Glyma.08G114900 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10527//PTHR10527:SF29 - IMPORTIN BETA Genomic Order:  1149
Name:  ? Glyma.08G114900 Secondary Identifier:  ? PAC:30541382
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G114900 0.5kb upstream 0.5kb upstream 9517 true Chr08: 8799531-8809047 Glycine max
Glyma.08G114900 0.5kb upstream 0.5kb upstream 500 false Chr08: 8799531-8800030 Glycine max
Glyma.08G114900 0.5kb downstream 0.5kb downstream 9517 true Chr08: 8800031-8809547 Glycine max
Glyma.08G114900 0.5kb downstream 0.5kb downstream 500 false Chr08: 8809048-8809547 Glycine max
Glyma.08G114900 1.0kb upstream 1.0kb upstream 10017 true Chr08: 8799031-8809047 Glycine max
Glyma.08G114900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8799031-8800030 Glycine max
Glyma.08G114900 1.0kb downstream 1.0kb downstream 10017 true Chr08: 8800031-8810047 Glycine max
Glyma.08G114900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8809048-8810047 Glycine max
Glyma.08G114900 2.0kb upstream 2.0kb upstream 11017 true Chr08: 8798031-8809047 Glycine max
Glyma.08G114900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8798031-8800030 Glycine max
Glyma.08G114900 2.0kb downstream 2.0kb downstream 11017 true Chr08: 8800031-8811047 Glycine max
Glyma.08G114900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8809048-8811047 Glycine max
Glyma.08G114900 5.0kb upstream 5.0kb upstream 14017 true Chr08: 8795031-8809047 Glycine max
Glyma.08G114900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8795031-8800030 Glycine max
Glyma.08G114900 5.0kb downstream 5.0kb downstream 14017 true Chr08: 8800031-8814047 Glycine max
Glyma.08G114900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8809048-8814047 Glycine max
Glyma.08G114900 10.0kb upstream 10.0kb upstream 19017 true Chr08: 8790031-8809047 Glycine max
Glyma.08G114900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8790031-8800030 Glycine max
Glyma.08G114900 10.0kb downstream 10.0kb downstream 19017 true Chr08: 8800031-8819047 Glycine max
Glyma.08G114900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8809048-8819047 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302052 5265 Fabidae View MSA
124071324 5270 Rosid View MSA
123743954 5271 Pentapetalae View MSA
122786465 5272 Eudicot View MSA
122043271 5273 Angiosperm View MSA
121344814 5274 Embryophyte View MSA
123426355 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.2086 0.0 41.7614    
cufflinks 12.1309 0.0 32.7917    
cufflinks 10.7435 0.0 28.8844    
cufflinks 17.2424 0.0 47.8459    
cufflinks 21.1836 0.0 60.2284 High High
cufflinks 8.11757 0.0 21.6712   Low
cufflinks 10.4578 0.0 28.0862    
cufflinks 15.3789 0.0 42.2797    
cufflinks 12.2093 0.0 33.048    
cufflinks 8.312     High High
cufflinks 3.008       Low
cufflinks 6.414        
cufflinks 8.965     High High
cufflinks 11.565     High High
cufflinks 4.038        
cufflinks 4.603        
cufflinks 6.438     High  
cufflinks 4.736        
cufflinks 8.329     High High
cufflinks 4.224        
cufflinks 4.865        
cufflinks 4.375        
cufflinks 4.42        
cufflinks 3.813        
cufflinks 4.293        
cufflinks 5.53        

0 Strain