Gene : Glyma.08G101400 G. max Wm82.a2.v1
Defline:  (1 of 4) PF09588 - YqaJ-like viral recombinase domain (YqaJ) Genomic Order:  1014
Name:  ? Glyma.08G101400 Secondary Identifier:  ? PAC:30540812
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G101400 0.5kb upstream 0.5kb upstream 2451 true Chr08: 7786430-7788880 Glycine max
Glyma.08G101400 0.5kb upstream 0.5kb upstream 500 false Chr08: 7788381-7788880 Glycine max
Glyma.08G101400 0.5kb downstream 0.5kb downstream 2451 true Chr08: 7785930-7788380 Glycine max
Glyma.08G101400 0.5kb downstream 0.5kb downstream 500 false Chr08: 7785930-7786429 Glycine max
Glyma.08G101400 1.0kb upstream 1.0kb upstream 2951 true Chr08: 7786430-7789380 Glycine max
Glyma.08G101400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7788381-7789380 Glycine max
Glyma.08G101400 1.0kb downstream 1.0kb downstream 2951 true Chr08: 7785430-7788380 Glycine max
Glyma.08G101400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7785430-7786429 Glycine max
Glyma.08G101400 2.0kb upstream 2.0kb upstream 3951 true Chr08: 7786430-7790380 Glycine max
Glyma.08G101400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7788381-7790380 Glycine max
Glyma.08G101400 2.0kb downstream 2.0kb downstream 3951 true Chr08: 7784430-7788380 Glycine max
Glyma.08G101400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7784430-7786429 Glycine max
Glyma.08G101400 5.0kb upstream 5.0kb upstream 6951 true Chr08: 7786430-7793380 Glycine max
Glyma.08G101400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7788381-7793380 Glycine max
Glyma.08G101400 5.0kb downstream 5.0kb downstream 6951 true Chr08: 7781430-7788380 Glycine max
Glyma.08G101400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7781430-7786429 Glycine max
Glyma.08G101400 10.0kb upstream 10.0kb upstream 11951 true Chr08: 7786430-7798380 Glycine max
Glyma.08G101400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7788381-7798380 Glycine max
Glyma.08G101400 10.0kb downstream 10.0kb downstream 11951 true Chr08: 7776430-7788380 Glycine max
Glyma.08G101400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7776430-7786429 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307470 5265 Fabidae View MSA
124064584 5270 Rosid View MSA
123738180 5271 Pentapetalae View MSA
122790598 5272 Eudicot View MSA
122045989 5273 Angiosperm View MSA
123429076 5275 Viridiplantae View MSA
121346090 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.98035 0.0 25.0295   High
cufflinks 5.99299 0.0 22.2766   High
cufflinks 2.43999 0.0 8.75911   Low
cufflinks 3.28557 0.0 11.3972    
cufflinks 3.06051 0.0 10.8364    
cufflinks 2.66908 0.0 9.64934    
cufflinks 4.43515 0.0 13.9803    
cufflinks 4.56177 0.0 14.2257    
cufflinks 3.06285 0.0 10.9535    
cufflinks 1.883        
cufflinks 1.481        
cufflinks 2.473        
cufflinks 1.806        
cufflinks 1.662        
cufflinks 1.034       Low
cufflinks 7.36     High High
cufflinks 0.735       Low
cufflinks 2.341        
cufflinks 3.039        
cufflinks 9.376     High High
cufflinks 1.843        
cufflinks 8.156     High High
cufflinks 7.247       High
cufflinks 1.658        
cufflinks 7.977     High High
cufflinks 1.2        

0 Strain