Gene : Glyma.08G104700 G. max Wm82.a2.v1
Defline:  (1 of 9) PF12265 - Histone-binding protein RBBP4 or subunit C of CAF1 complex (CAF1C_H4-bd) Genomic Order:  1047
Name:  ? Glyma.08G104700 Secondary Identifier:  ? PAC:30538889
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G104700 0.5kb upstream 0.5kb upstream 5321 true Chr08: 8055039-8060359 Glycine max
Glyma.08G104700 0.5kb upstream 0.5kb upstream 500 false Chr08: 8059860-8060359 Glycine max
Glyma.08G104700 0.5kb downstream 0.5kb downstream 5321 true Chr08: 8054539-8059859 Glycine max
Glyma.08G104700 0.5kb downstream 0.5kb downstream 500 false Chr08: 8054539-8055038 Glycine max
Glyma.08G104700 1.0kb upstream 1.0kb upstream 5821 true Chr08: 8055039-8060859 Glycine max
Glyma.08G104700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8059860-8060859 Glycine max
Glyma.08G104700 1.0kb downstream 1.0kb downstream 5821 true Chr08: 8054039-8059859 Glycine max
Glyma.08G104700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8054039-8055038 Glycine max
Glyma.08G104700 2.0kb upstream 2.0kb upstream 6821 true Chr08: 8055039-8061859 Glycine max
Glyma.08G104700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8059860-8061859 Glycine max
Glyma.08G104700 2.0kb downstream 2.0kb downstream 6821 true Chr08: 8053039-8059859 Glycine max
Glyma.08G104700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8053039-8055038 Glycine max
Glyma.08G104700 5.0kb upstream 5.0kb upstream 9821 true Chr08: 8055039-8064859 Glycine max
Glyma.08G104700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8059860-8064859 Glycine max
Glyma.08G104700 5.0kb downstream 5.0kb downstream 9821 true Chr08: 8050039-8059859 Glycine max
Glyma.08G104700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8050039-8055038 Glycine max
Glyma.08G104700 10.0kb upstream 10.0kb upstream 14821 true Chr08: 8055039-8069859 Glycine max
Glyma.08G104700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8059860-8069859 Glycine max
Glyma.08G104700 10.0kb downstream 10.0kb downstream 14821 true Chr08: 8045039-8059859 Glycine max
Glyma.08G104700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8045039-8055038 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300632 5265 Fabidae View MSA
124069460 5270 Rosid View MSA
123741946 5271 Pentapetalae View MSA
122794414 5272 Eudicot View MSA
122048731 5273 Angiosperm View MSA
121348301 5274 Embryophyte View MSA
123425749 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.4979 0.0 41.3578   High
cufflinks 9.03962 0.0 24.5788    
cufflinks 7.25569 0.0 19.9882   Low
cufflinks 8.68891 0.0 23.6655    
cufflinks 9.62128 0.0 26.0635    
cufflinks 8.07544 0.0 22.102    
cufflinks 8.04038 0.0 22.0371    
cufflinks 12.9562 0.0 34.6634   High
cufflinks 8.18358 0.0 22.382    
cufflinks 3.909        
cufflinks 1.512       Low
cufflinks 4.756       High
cufflinks 4.67       High
cufflinks 5.337       High
cufflinks 2.086       Low
cufflinks 2.77        
cufflinks 3.733        
cufflinks 4.152        
cufflinks 4.665       High
cufflinks 2.997        
cufflinks 1.938       Low
cufflinks 3.072        
cufflinks 4.077        
cufflinks 1.748       Low
cufflinks 3.02        
cufflinks 2.749        

0 Strain