Gene : Glyma.08G093900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31062:SF44 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 27-RELATED Genomic Order:  939
Name:  ? Glyma.08G093900 Secondary Identifier:  ? PAC:30537155
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G093900 0.5kb upstream 0.5kb upstream 3453 true Chr08: 7120394-7123846 Glycine max
Glyma.08G093900 0.5kb upstream 0.5kb upstream 500 false Chr08: 7123347-7123846 Glycine max
Glyma.08G093900 0.5kb downstream 0.5kb downstream 3453 true Chr08: 7119894-7123346 Glycine max
Glyma.08G093900 0.5kb downstream 0.5kb downstream 500 false Chr08: 7119894-7120393 Glycine max
Glyma.08G093900 1.0kb upstream 1.0kb upstream 3953 true Chr08: 7120394-7124346 Glycine max
Glyma.08G093900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7123347-7124346 Glycine max
Glyma.08G093900 1.0kb downstream 1.0kb downstream 3953 true Chr08: 7119394-7123346 Glycine max
Glyma.08G093900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7119394-7120393 Glycine max
Glyma.08G093900 2.0kb upstream 2.0kb upstream 4953 true Chr08: 7120394-7125346 Glycine max
Glyma.08G093900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7123347-7125346 Glycine max
Glyma.08G093900 2.0kb downstream 2.0kb downstream 4953 true Chr08: 7118394-7123346 Glycine max
Glyma.08G093900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7118394-7120393 Glycine max
Glyma.08G093900 5.0kb upstream 5.0kb upstream 7953 true Chr08: 7120394-7128346 Glycine max
Glyma.08G093900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7123347-7128346 Glycine max
Glyma.08G093900 5.0kb downstream 5.0kb downstream 7953 true Chr08: 7115394-7123346 Glycine max
Glyma.08G093900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7115394-7120393 Glycine max
Glyma.08G093900 10.0kb upstream 10.0kb upstream 12953 true Chr08: 7120394-7133346 Glycine max
Glyma.08G093900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7123347-7133346 Glycine max
Glyma.08G093900 10.0kb downstream 10.0kb downstream 12953 true Chr08: 7110394-7123346 Glycine max
Glyma.08G093900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7110394-7120393 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309584 5265 Fabidae View MSA
124065411 5270 Rosid View MSA
123745247 5271 Pentapetalae View MSA
122794660 5272 Eudicot View MSA
122049542 5273 Angiosperm View MSA
121347970 5274 Embryophyte View MSA
123380694 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.73075 0.0 28.3846    
cufflinks 9.44364 0.0 30.2499    
cufflinks 8.65985 0.0 28.1393    
cufflinks 10.1937 0.0 32.3033    
cufflinks 18.9406 0.0 67.8971    
cufflinks 13.0338 0.0 47.3633    
cufflinks 13.6152 0.0 41.5503    
cufflinks 38.2247 0.0 140.127 High High
cufflinks 35.4776 0.0 109.182 High High
cufflinks 6.437        
cufflinks 4.914        
cufflinks 3.954        
cufflinks 6.028        
cufflinks 5.931        
cufflinks 12.639     High High
cufflinks 5.571        
cufflinks 8.795     High High
cufflinks 2.102       Low
cufflinks 5.115        
cufflinks 5.012        
cufflinks 5.367        
cufflinks 4.548        
cufflinks 5.155        
cufflinks 4.26        
cufflinks 4.579        
cufflinks 6.618     High  

0 Strain