Gene : Glyma.08G094900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31448:SF3 - IFA-BINDING PROTEIN Genomic Order:  949
Name:  ? Glyma.08G094900 Secondary Identifier:  ? PAC:30536918
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G094900 0.5kb upstream 0.5kb upstream 4984 true Chr08: 7218371-7223354 Glycine max
Glyma.08G094900 0.5kb upstream 0.5kb upstream 500 false Chr08: 7222855-7223354 Glycine max
Glyma.08G094900 0.5kb downstream 0.5kb downstream 4984 true Chr08: 7217871-7222854 Glycine max
Glyma.08G094900 0.5kb downstream 0.5kb downstream 500 false Chr08: 7217871-7218370 Glycine max
Glyma.08G094900 1.0kb upstream 1.0kb upstream 5484 true Chr08: 7218371-7223854 Glycine max
Glyma.08G094900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7222855-7223854 Glycine max
Glyma.08G094900 1.0kb downstream 1.0kb downstream 5484 true Chr08: 7217371-7222854 Glycine max
Glyma.08G094900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7217371-7218370 Glycine max
Glyma.08G094900 2.0kb upstream 2.0kb upstream 6484 true Chr08: 7218371-7224854 Glycine max
Glyma.08G094900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7222855-7224854 Glycine max
Glyma.08G094900 2.0kb downstream 2.0kb downstream 6484 true Chr08: 7216371-7222854 Glycine max
Glyma.08G094900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7216371-7218370 Glycine max
Glyma.08G094900 5.0kb upstream 5.0kb upstream 9484 true Chr08: 7218371-7227854 Glycine max
Glyma.08G094900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7222855-7227854 Glycine max
Glyma.08G094900 5.0kb downstream 5.0kb downstream 9484 true Chr08: 7213371-7222854 Glycine max
Glyma.08G094900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7213371-7218370 Glycine max
Glyma.08G094900 10.0kb upstream 10.0kb upstream 14484 true Chr08: 7218371-7232854 Glycine max
Glyma.08G094900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7222855-7232854 Glycine max
Glyma.08G094900 10.0kb downstream 10.0kb downstream 14484 true Chr08: 7208371-7222854 Glycine max
Glyma.08G094900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7208371-7218370 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313978 5265 Fabidae View MSA
124070207 5270 Rosid View MSA
123753700 5271 Pentapetalae View MSA
122788125 5272 Eudicot View MSA
122050916 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.08981 0.0 11.0352    
cufflinks 5.6532 0.0 15.0965    
cufflinks 2.51452 0.0 6.98739   Low
cufflinks 12.239 0.0 33.3985   High
cufflinks 5.12293 0.0 13.7177    
cufflinks 13.6022 0.0 37.3105   High
cufflinks 6.7276 0.0 17.9484    
cufflinks 13.8755 0.0 38.2448   High
cufflinks 5.87793 0.0 15.691    
cufflinks 21.684     High High
cufflinks 5.817     High  
cufflinks 5.315        
cufflinks 11.07     High  
cufflinks 7.142     High  
cufflinks 2.315       Low
cufflinks 5.619        
cufflinks 6.911     High  
cufflinks 7.973     High  
cufflinks 6.49        
cufflinks 3.267       Low
cufflinks 12.878     High High
cufflinks 5.01        
cufflinks 3.181       Low
cufflinks 8.778     High  
cufflinks 4.209        
cufflinks 16.763     High High

0 Strain