Gene : Glyma.08G097900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31072:SF2 - TRANSCRIPTION FACTOR TCP2-RELATED Genomic Order:  979
Name:  ? Glyma.08G097900 Secondary Identifier:  ? PAC:30537576
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G097900 0.5kb upstream 0.5kb upstream 5572 true Chr08: 7489720-7495291 Glycine max
Glyma.08G097900 0.5kb upstream 0.5kb upstream 500 false Chr08: 7494792-7495291 Glycine max
Glyma.08G097900 0.5kb downstream 0.5kb downstream 5572 true Chr08: 7489220-7494791 Glycine max
Glyma.08G097900 0.5kb downstream 0.5kb downstream 500 false Chr08: 7489220-7489719 Glycine max
Glyma.08G097900 1.0kb upstream 1.0kb upstream 6072 true Chr08: 7489720-7495791 Glycine max
Glyma.08G097900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7494792-7495791 Glycine max
Glyma.08G097900 1.0kb downstream 1.0kb downstream 6072 true Chr08: 7488720-7494791 Glycine max
Glyma.08G097900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7488720-7489719 Glycine max
Glyma.08G097900 2.0kb upstream 2.0kb upstream 7072 true Chr08: 7489720-7496791 Glycine max
Glyma.08G097900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7494792-7496791 Glycine max
Glyma.08G097900 2.0kb downstream 2.0kb downstream 7072 true Chr08: 7487720-7494791 Glycine max
Glyma.08G097900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7487720-7489719 Glycine max
Glyma.08G097900 5.0kb upstream 5.0kb upstream 10072 true Chr08: 7489720-7499791 Glycine max
Glyma.08G097900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7494792-7499791 Glycine max
Glyma.08G097900 5.0kb downstream 5.0kb downstream 10072 true Chr08: 7484720-7494791 Glycine max
Glyma.08G097900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7484720-7489719 Glycine max
Glyma.08G097900 10.0kb upstream 10.0kb upstream 15072 true Chr08: 7489720-7504791 Glycine max
Glyma.08G097900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7494792-7504791 Glycine max
Glyma.08G097900 10.0kb downstream 10.0kb downstream 15072 true Chr08: 7479720-7494791 Glycine max
Glyma.08G097900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7479720-7489719 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250487 5265 Fabidae View MSA
124069412 5270 Rosid View MSA
123743584 5271 Pentapetalae View MSA
122787368 5272 Eudicot View MSA
122042527 5273 Angiosperm View MSA
121350950 5274 Embryophyte View MSA
123381946 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.3512 0.0 47.2188    
cufflinks 21.4149 0.0 59.3014 High High
cufflinks 5.56749 0.0 15.037    
cufflinks 22.0272 0.0 61.2582 High High
cufflinks 4.14232 0.0 11.4363    
cufflinks 4.63127 0.0 12.6679    
cufflinks 9.21919 0.0 24.596    
cufflinks 2.93523 0.0 8.35205   Low
cufflinks 12.6335 0.0 33.8691    
cufflinks 2.328       Low
cufflinks 15.778     High  
cufflinks 8.793     High  
cufflinks 13.894     High  
cufflinks 1.1       Low
cufflinks 8.771     High  
cufflinks 76.037     High High
cufflinks 10.993     High  
cufflinks 12.642     High  
cufflinks 17.423     High  
cufflinks 76.585     High High
cufflinks 16.088     High  
cufflinks 56.971     High High
cufflinks 39.499     High  
cufflinks 24.022     High  
cufflinks 65.865     High High
cufflinks 13.287     High  

0 Strain