Gene : Glyma.08G100300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11214:SF92 - BETA-1,3-GALACTOSYLTRANSFERASE 20-RELATED Genomic Order:  1003
Name:  ? Glyma.08G100300 Secondary Identifier:  ? PAC:30541350
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G100300 0.5kb upstream 0.5kb upstream 5943 true Chr08: 7703784-7709726 Glycine max
Glyma.08G100300 0.5kb upstream 0.5kb upstream 500 false Chr08: 7703784-7704283 Glycine max
Glyma.08G100300 0.5kb downstream 0.5kb downstream 5943 true Chr08: 7704284-7710226 Glycine max
Glyma.08G100300 0.5kb downstream 0.5kb downstream 500 false Chr08: 7709727-7710226 Glycine max
Glyma.08G100300 1.0kb upstream 1.0kb upstream 6443 true Chr08: 7703284-7709726 Glycine max
Glyma.08G100300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7703284-7704283 Glycine max
Glyma.08G100300 1.0kb downstream 1.0kb downstream 6443 true Chr08: 7704284-7710726 Glycine max
Glyma.08G100300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7709727-7710726 Glycine max
Glyma.08G100300 2.0kb upstream 2.0kb upstream 7443 true Chr08: 7702284-7709726 Glycine max
Glyma.08G100300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7702284-7704283 Glycine max
Glyma.08G100300 2.0kb downstream 2.0kb downstream 7443 true Chr08: 7704284-7711726 Glycine max
Glyma.08G100300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7709727-7711726 Glycine max
Glyma.08G100300 5.0kb upstream 5.0kb upstream 10443 true Chr08: 7699284-7709726 Glycine max
Glyma.08G100300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7699284-7704283 Glycine max
Glyma.08G100300 5.0kb downstream 5.0kb downstream 10443 true Chr08: 7704284-7714726 Glycine max
Glyma.08G100300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7709727-7714726 Glycine max
Glyma.08G100300 10.0kb upstream 10.0kb upstream 15443 true Chr08: 7694284-7709726 Glycine max
Glyma.08G100300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7694284-7704283 Glycine max
Glyma.08G100300 10.0kb downstream 10.0kb downstream 15443 true Chr08: 7704284-7719726 Glycine max
Glyma.08G100300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7709727-7719726 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306660 5265 Fabidae View MSA
124064746 5270 Rosid View MSA
123750268 5271 Pentapetalae View MSA
122792852 5272 Eudicot View MSA
122049644 5273 Angiosperm View MSA
121350326 5274 Embryophyte View MSA
123381679 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.39185 0.0 8.68344    
cufflinks 2.93174 0.0 15.8512    
cufflinks 1.58353 0.0 6.54717   Low
cufflinks 5.12648 0.0 18.4209    
cufflinks 1.57943 0.0 6.53301   Low
cufflinks 6.99318 0.0 31.3883   High
cufflinks 5.78157 0.0 20.3657   High
cufflinks 3.42585 0.0 11.3437    
cufflinks 1.87793 0.0 7.37139    
cufflinks 1.215        
cufflinks 0.237       Low
cufflinks 1.001        
cufflinks 0.451        
cufflinks 0.437        
cufflinks 0.155       Low
cufflinks 1.7       High
cufflinks 0.302       Low
cufflinks 1.49        
cufflinks 0.91        
cufflinks 2.461       High
cufflinks 0.48        
cufflinks 2.057       High
cufflinks 0.919        
cufflinks 0.352        
cufflinks 2.089       High
cufflinks 0.31        

0 Strain