Gene : Glyma.08G140300 G. max Wm82.a2.v1
Defline:  (1 of 57) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1403
Name:  ? Glyma.08G140300 Secondary Identifier:  ? PAC:30536511
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G140300 0.5kb upstream 0.5kb upstream 4195 true Chr08: 10736462-10740656 Glycine max
Glyma.08G140300 0.5kb upstream 0.5kb upstream 500 false Chr08: 10740157-10740656 Glycine max
Glyma.08G140300 0.5kb downstream 0.5kb downstream 4195 true Chr08: 10735962-10740156 Glycine max
Glyma.08G140300 0.5kb downstream 0.5kb downstream 500 false Chr08: 10735962-10736461 Glycine max
Glyma.08G140300 1.0kb upstream 1.0kb upstream 4695 true Chr08: 10736462-10741156 Glycine max
Glyma.08G140300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10740157-10741156 Glycine max
Glyma.08G140300 1.0kb downstream 1.0kb downstream 4695 true Chr08: 10735462-10740156 Glycine max
Glyma.08G140300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10735462-10736461 Glycine max
Glyma.08G140300 2.0kb upstream 2.0kb upstream 5695 true Chr08: 10736462-10742156 Glycine max
Glyma.08G140300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10740157-10742156 Glycine max
Glyma.08G140300 2.0kb downstream 2.0kb downstream 5695 true Chr08: 10734462-10740156 Glycine max
Glyma.08G140300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10734462-10736461 Glycine max
Glyma.08G140300 5.0kb upstream 5.0kb upstream 8695 true Chr08: 10736462-10745156 Glycine max
Glyma.08G140300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10740157-10745156 Glycine max
Glyma.08G140300 5.0kb downstream 5.0kb downstream 8695 true Chr08: 10731462-10740156 Glycine max
Glyma.08G140300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10731462-10736461 Glycine max
Glyma.08G140300 10.0kb upstream 10.0kb upstream 13695 true Chr08: 10736462-10750156 Glycine max
Glyma.08G140300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10740157-10750156 Glycine max
Glyma.08G140300 10.0kb downstream 10.0kb downstream 13695 true Chr08: 10726462-10740156 Glycine max
Glyma.08G140300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10726462-10736461 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314844 5265 Fabidae View MSA
124065568 5270 Rosid View MSA
123738247 5271 Pentapetalae View MSA
122787727 5272 Eudicot View MSA
122046290 5273 Angiosperm View MSA
121345474 5274 Embryophyte View MSA
123380225 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.44166 0.0 30.4404   High
cufflinks 4.45377 0.0 20.4751    
cufflinks 8.43223 0.0 37.2125   High
cufflinks 3.42601 0.0 17.7178    
cufflinks 2.23163 0.0 11.5187    
cufflinks 1.1088 0.0 6.06501   Low
cufflinks 3.10995 0.0 12.1635    
cufflinks 5.2778 0.0 23.1458    
cufflinks 2.34409 0.0 9.94784    
cufflinks 0.444        
cufflinks 0.467        
cufflinks 0.902       High
cufflinks 0.198       Low
cufflinks 0.165       Low
cufflinks 0.698        
cufflinks 0.78        
cufflinks 0.472        
cufflinks 0.495        
cufflinks 0.582        
cufflinks 0.883       High
cufflinks 0.419        
cufflinks 0.865       High
cufflinks 0.711        
cufflinks 0.518        
cufflinks 0.782        
cufflinks 0.337        

0 Strain