Gene : Glyma.08G142700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10072:SF48 - IRON-SULFUR ASSEMBLY PROTEIN ISCA, CHLOROPLASTIC Genomic Order:  1427
Name:  ? Glyma.08G142700 Secondary Identifier:  ? PAC:30539102
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G142700 0.5kb upstream 0.5kb upstream 3453 true Chr08: 10857223-10860675 Glycine max
Glyma.08G142700 0.5kb upstream 0.5kb upstream 500 false Chr08: 10857223-10857722 Glycine max
Glyma.08G142700 0.5kb downstream 0.5kb downstream 3453 true Chr08: 10857723-10861175 Glycine max
Glyma.08G142700 0.5kb downstream 0.5kb downstream 500 false Chr08: 10860676-10861175 Glycine max
Glyma.08G142700 1.0kb upstream 1.0kb upstream 3953 true Chr08: 10856723-10860675 Glycine max
Glyma.08G142700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10856723-10857722 Glycine max
Glyma.08G142700 1.0kb downstream 1.0kb downstream 3953 true Chr08: 10857723-10861675 Glycine max
Glyma.08G142700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10860676-10861675 Glycine max
Glyma.08G142700 2.0kb upstream 2.0kb upstream 4953 true Chr08: 10855723-10860675 Glycine max
Glyma.08G142700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10855723-10857722 Glycine max
Glyma.08G142700 2.0kb downstream 2.0kb downstream 4953 true Chr08: 10857723-10862675 Glycine max
Glyma.08G142700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10860676-10862675 Glycine max
Glyma.08G142700 5.0kb upstream 5.0kb upstream 7953 true Chr08: 10852723-10860675 Glycine max
Glyma.08G142700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10852723-10857722 Glycine max
Glyma.08G142700 5.0kb downstream 5.0kb downstream 7953 true Chr08: 10857723-10865675 Glycine max
Glyma.08G142700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10860676-10865675 Glycine max
Glyma.08G142700 10.0kb upstream 10.0kb upstream 12953 true Chr08: 10847723-10860675 Glycine max
Glyma.08G142700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10847723-10857722 Glycine max
Glyma.08G142700 10.0kb downstream 10.0kb downstream 12953 true Chr08: 10857723-10870675 Glycine max
Glyma.08G142700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10860676-10870675 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306039 5265 Fabidae View MSA
124065003 5270 Rosid View MSA
123740000 5271 Pentapetalae View MSA
122792600 5272 Eudicot View MSA
122046362 5273 Angiosperm View MSA
121346119 5274 Embryophyte View MSA
123427871 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 172.708 0.0 501.806 High High
cufflinks 36.1654 0.0 96.9286 High  
cufflinks 140.36 0.0 397.979 High High
cufflinks 39.9057 0.0 106.7 High  
cufflinks 25.1186 0.0 68.5948 High Low
cufflinks 37.4798 0.0 100.356 High  
cufflinks 72.8215 0.0 195.662 High  
cufflinks 54.8858 0.0 146.528 High  
cufflinks 27.2752 0.0 74.0031 High  
cufflinks 7.45        
cufflinks 6.554     High  
cufflinks 17.745     High High
cufflinks 2.777       Low
cufflinks 2.214       Low
cufflinks 4.754        
cufflinks 9.68     High  
cufflinks 4.066        
cufflinks 8.404     High  
cufflinks 5.621        
cufflinks 10.738     High  
cufflinks 3.919        
cufflinks 10.75     High  
cufflinks 9.605     High  
cufflinks 7.527     High  
cufflinks 10.518     High  
cufflinks 4.745        

0 Strain