Gene : Glyma.08G145100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24006:SF455 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 27 Genomic Order:  1451
Name:  ? Glyma.08G145100 Secondary Identifier:  ? PAC:30539243
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G145100 0.5kb upstream 0.5kb upstream 5153 true Chr08: 11027960-11033112 Glycine max
Glyma.08G145100 0.5kb upstream 0.5kb upstream 500 false Chr08: 11032613-11033112 Glycine max
Glyma.08G145100 0.5kb downstream 0.5kb downstream 5153 true Chr08: 11027460-11032612 Glycine max
Glyma.08G145100 0.5kb downstream 0.5kb downstream 500 false Chr08: 11027460-11027959 Glycine max
Glyma.08G145100 1.0kb upstream 1.0kb upstream 5653 true Chr08: 11027960-11033612 Glycine max
Glyma.08G145100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 11032613-11033612 Glycine max
Glyma.08G145100 1.0kb downstream 1.0kb downstream 5653 true Chr08: 11026960-11032612 Glycine max
Glyma.08G145100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 11026960-11027959 Glycine max
Glyma.08G145100 2.0kb upstream 2.0kb upstream 6653 true Chr08: 11027960-11034612 Glycine max
Glyma.08G145100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 11032613-11034612 Glycine max
Glyma.08G145100 2.0kb downstream 2.0kb downstream 6653 true Chr08: 11025960-11032612 Glycine max
Glyma.08G145100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 11025960-11027959 Glycine max
Glyma.08G145100 5.0kb upstream 5.0kb upstream 9653 true Chr08: 11027960-11037612 Glycine max
Glyma.08G145100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 11032613-11037612 Glycine max
Glyma.08G145100 5.0kb downstream 5.0kb downstream 9653 true Chr08: 11022960-11032612 Glycine max
Glyma.08G145100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 11022960-11027959 Glycine max
Glyma.08G145100 10.0kb upstream 10.0kb upstream 14653 true Chr08: 11027960-11042612 Glycine max
Glyma.08G145100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 11032613-11042612 Glycine max
Glyma.08G145100 10.0kb downstream 10.0kb downstream 14653 true Chr08: 11017960-11032612 Glycine max
Glyma.08G145100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 11017960-11027959 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041324 5273 Angiosperm View MSA
122305903 5265 Fabidae View MSA
124063366 5270 Rosid View MSA
123746952 5271 Pentapetalae View MSA
122793650 5272 Eudicot View MSA
121348941 5274 Embryophyte View MSA
123381089 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.7257 0.0 8.3369    
cufflinks 3.58585 0.0 10.5363    
cufflinks 4.88631 0.0 13.7977   High
cufflinks 4.30112 0.0 12.3455    
cufflinks 2.27929 0.0 7.1558   Low
cufflinks 1.73737 0.0 5.65213   Low
cufflinks 4.17855 0.0 12.0864    
cufflinks 3.16782 0.0 9.4635    
cufflinks 3.50487 0.0 10.3271    
cufflinks 0.985        
cufflinks 1.172        
cufflinks 2.643       High
cufflinks 1.034        
cufflinks 1.45        
cufflinks 1.248        
cufflinks 1.249        
cufflinks 0.47       Low
cufflinks 1.885       High
cufflinks 2.123       High
cufflinks 1.64        
cufflinks 1.17        
cufflinks 1.407        
cufflinks 1.216        
cufflinks 0.981        
cufflinks 1.347        
cufflinks 0.538       Low

0 Strain