Gene : Glyma.08G146500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11937//PTHR11937:SF217 - ACTIN Genomic Order:  1465
Name:  ? Glyma.08G146500 Secondary Identifier:  ? PAC:30539324
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G146500 0.5kb upstream 0.5kb upstream 3872 true Chr08: 11145877-11149748 Glycine max
Glyma.08G146500 0.5kb upstream 0.5kb upstream 500 false Chr08: 11149249-11149748 Glycine max
Glyma.08G146500 0.5kb downstream 0.5kb downstream 3872 true Chr08: 11145377-11149248 Glycine max
Glyma.08G146500 0.5kb downstream 0.5kb downstream 500 false Chr08: 11145377-11145876 Glycine max
Glyma.08G146500 1.0kb upstream 1.0kb upstream 4372 true Chr08: 11145877-11150248 Glycine max
Glyma.08G146500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 11149249-11150248 Glycine max
Glyma.08G146500 1.0kb downstream 1.0kb downstream 4372 true Chr08: 11144877-11149248 Glycine max
Glyma.08G146500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 11144877-11145876 Glycine max
Glyma.08G146500 2.0kb upstream 2.0kb upstream 5372 true Chr08: 11145877-11151248 Glycine max
Glyma.08G146500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 11149249-11151248 Glycine max
Glyma.08G146500 2.0kb downstream 2.0kb downstream 5372 true Chr08: 11143877-11149248 Glycine max
Glyma.08G146500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 11143877-11145876 Glycine max
Glyma.08G146500 5.0kb upstream 5.0kb upstream 8372 true Chr08: 11145877-11154248 Glycine max
Glyma.08G146500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 11149249-11154248 Glycine max
Glyma.08G146500 5.0kb downstream 5.0kb downstream 8372 true Chr08: 11140877-11149248 Glycine max
Glyma.08G146500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 11140877-11145876 Glycine max
Glyma.08G146500 10.0kb upstream 10.0kb upstream 13372 true Chr08: 11145877-11159248 Glycine max
Glyma.08G146500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 11149249-11159248 Glycine max
Glyma.08G146500 10.0kb downstream 10.0kb downstream 13372 true Chr08: 11135877-11149248 Glycine max
Glyma.08G146500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 11135877-11145876 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250183 5265 Fabidae View MSA
124051691 5270 Rosid View MSA
123754059 5271 Pentapetalae View MSA
122775472 5272 Eudicot View MSA
122049993 5273 Angiosperm View MSA
123429016 5275 Viridiplantae View MSA
121350794 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.7197 0.0 31.4631   Low
cufflinks 101.668 0.0 323.485 High  
cufflinks 12.7416 0.0 34.0873   Low
cufflinks 82.1618 0.0 251.779 High  
cufflinks 98.628 0.0 312.073 High  
cufflinks 49.9749 0.0 142.59 High  
cufflinks 111.507 0.0 361.081 High  
cufflinks 108.033 0.0 348.87 High  
cufflinks 60.4737 0.0 177.015 High  
cufflinks 84.346     High High
cufflinks 3.473       Low
cufflinks 14.648     High  
cufflinks 58.872     High High
cufflinks 79.658     High High
cufflinks 8.141     High  
cufflinks 26.052     High  
cufflinks 11.767     High  
cufflinks 53.277     High  
cufflinks 56.514     High High
cufflinks 21.751     High  
cufflinks 7.338     High  
cufflinks 22.512     High  
cufflinks 28.236     High  
cufflinks 2.904       Low
cufflinks 23.126     High  
cufflinks 8.909     High  

0 Strain