Gene : Glyma.08G135700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12059 - RIBOSOMAL PROTEIN L23-RELATED Genomic Order:  1357
Name:  ? Glyma.08G135700 Secondary Identifier:  ? PAC:30538524
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G135700 0.5kb upstream 0.5kb upstream 1399 true Chr08: 10387906-10389304 Glycine max
Glyma.08G135700 0.5kb upstream 0.5kb upstream 500 false Chr08: 10388805-10389304 Glycine max
Glyma.08G135700 0.5kb downstream 0.5kb downstream 1399 true Chr08: 10387406-10388804 Glycine max
Glyma.08G135700 0.5kb downstream 0.5kb downstream 500 false Chr08: 10387406-10387905 Glycine max
Glyma.08G135700 1.0kb upstream 1.0kb upstream 1899 true Chr08: 10387906-10389804 Glycine max
Glyma.08G135700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10388805-10389804 Glycine max
Glyma.08G135700 1.0kb downstream 1.0kb downstream 1899 true Chr08: 10386906-10388804 Glycine max
Glyma.08G135700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10386906-10387905 Glycine max
Glyma.08G135700 2.0kb upstream 2.0kb upstream 2899 true Chr08: 10387906-10390804 Glycine max
Glyma.08G135700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10388805-10390804 Glycine max
Glyma.08G135700 2.0kb downstream 2.0kb downstream 2899 true Chr08: 10385906-10388804 Glycine max
Glyma.08G135700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10385906-10387905 Glycine max
Glyma.08G135700 5.0kb upstream 5.0kb upstream 5899 true Chr08: 10387906-10393804 Glycine max
Glyma.08G135700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10388805-10393804 Glycine max
Glyma.08G135700 5.0kb downstream 5.0kb downstream 5899 true Chr08: 10382906-10388804 Glycine max
Glyma.08G135700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10382906-10387905 Glycine max
Glyma.08G135700 10.0kb upstream 10.0kb upstream 10899 true Chr08: 10387906-10398804 Glycine max
Glyma.08G135700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10388805-10398804 Glycine max
Glyma.08G135700 10.0kb downstream 10.0kb downstream 10899 true Chr08: 10377906-10388804 Glycine max
Glyma.08G135700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10377906-10387905 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121691029 5273 Angiosperm View MSA
122313500 5265 Fabidae View MSA
124037876 5270 Rosid View MSA
123646715 5271 Pentapetalae View MSA
122680771 5272 Eudicot View MSA
121349805 5274 Embryophyte View MSA
123426659 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.3533 0.0 8.36544    
cufflinks 1.21963 0.0 4.51236    
cufflinks 0.116152 0.0 0.474397 Low Low
cufflinks 0.863405 0.0 3.2444    
cufflinks 1.48814 0.0 5.44287    
cufflinks 0.742773 0.0 2.81299    
cufflinks 3.74852 0.0 12.7558   High
cufflinks 0.477614 0.0 1.84266    
cufflinks 2.36357 0.0 8.38624    
cufflinks 0.133       Low
cufflinks 0.277        
cufflinks 0.628        
cufflinks 1.094       High
cufflinks 1.25       High
cufflinks 0.649        
cufflinks 0.145        
cufflinks 0.898       High
cufflinks 0.333        
cufflinks 0.695        
cufflinks 0.1       Low
cufflinks 0.21        
cufflinks 0.08     Low Low
cufflinks 0.303        
cufflinks 0.38        
cufflinks 0.12       Low
cufflinks 0.517        

0 Strain