Gene : Glyma.08G137100 G. max Wm82.a2.v1
Defline:  (1 of 1) PF00515//PF07719//PF13371//PF13414 - Tetratricopeptide repeat (TPR_1) // Tetratricopeptide repeat (TPR_2) // Tetratricopeptide repeat (TPR_9) // TPR repeat (TPR_11) Genomic Order:  1371
Name:  ? Glyma.08G137100 Secondary Identifier:  ? PAC:30538966
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G137100 0.5kb upstream 0.5kb upstream 3102 true Chr08: 10474935-10478036 Glycine max
Glyma.08G137100 0.5kb upstream 0.5kb upstream 500 false Chr08: 10477537-10478036 Glycine max
Glyma.08G137100 0.5kb downstream 0.5kb downstream 3102 true Chr08: 10474435-10477536 Glycine max
Glyma.08G137100 0.5kb downstream 0.5kb downstream 500 false Chr08: 10474435-10474934 Glycine max
Glyma.08G137100 1.0kb upstream 1.0kb upstream 3602 true Chr08: 10474935-10478536 Glycine max
Glyma.08G137100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10477537-10478536 Glycine max
Glyma.08G137100 1.0kb downstream 1.0kb downstream 3602 true Chr08: 10473935-10477536 Glycine max
Glyma.08G137100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10473935-10474934 Glycine max
Glyma.08G137100 2.0kb upstream 2.0kb upstream 4602 true Chr08: 10474935-10479536 Glycine max
Glyma.08G137100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10477537-10479536 Glycine max
Glyma.08G137100 2.0kb downstream 2.0kb downstream 4602 true Chr08: 10472935-10477536 Glycine max
Glyma.08G137100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10472935-10474934 Glycine max
Glyma.08G137100 5.0kb upstream 5.0kb upstream 7602 true Chr08: 10474935-10482536 Glycine max
Glyma.08G137100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10477537-10482536 Glycine max
Glyma.08G137100 5.0kb downstream 5.0kb downstream 7602 true Chr08: 10469935-10477536 Glycine max
Glyma.08G137100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10469935-10474934 Glycine max
Glyma.08G137100 10.0kb upstream 10.0kb upstream 12602 true Chr08: 10474935-10487536 Glycine max
Glyma.08G137100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10477537-10487536 Glycine max
Glyma.08G137100 10.0kb downstream 10.0kb downstream 12602 true Chr08: 10464935-10477536 Glycine max
Glyma.08G137100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10464935-10474934 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304897 5265 Fabidae View MSA
124063288 5270 Rosid View MSA
123737789 5271 Pentapetalae View MSA
122790297 5272 Eudicot View MSA
122047040 5273 Angiosperm View MSA
121310683 5274 Embryophyte View MSA
123348108 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.396666 0.0 1.45924    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0516393 0.0 0.207303 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.169       High
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.426       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  

0 Strain