Gene : Glyma.08G137300 G. max Wm82.a2.v1
Defline:  (1 of 75) PF05678 - VQ motif (VQ) Genomic Order:  1373
Name:  ? Glyma.08G137300 Secondary Identifier:  ? PAC:30537192
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G137300 0.5kb upstream 0.5kb upstream 3130 true Chr08: 10494940-10498069 Glycine max
Glyma.08G137300 0.5kb upstream 0.5kb upstream 500 false Chr08: 10494940-10495439 Glycine max
Glyma.08G137300 0.5kb downstream 0.5kb downstream 3130 true Chr08: 10495440-10498569 Glycine max
Glyma.08G137300 0.5kb downstream 0.5kb downstream 500 false Chr08: 10498070-10498569 Glycine max
Glyma.08G137300 1.0kb upstream 1.0kb upstream 3630 true Chr08: 10494440-10498069 Glycine max
Glyma.08G137300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10494440-10495439 Glycine max
Glyma.08G137300 1.0kb downstream 1.0kb downstream 3630 true Chr08: 10495440-10499069 Glycine max
Glyma.08G137300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10498070-10499069 Glycine max
Glyma.08G137300 2.0kb upstream 2.0kb upstream 4630 true Chr08: 10493440-10498069 Glycine max
Glyma.08G137300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10493440-10495439 Glycine max
Glyma.08G137300 2.0kb downstream 2.0kb downstream 4630 true Chr08: 10495440-10500069 Glycine max
Glyma.08G137300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10498070-10500069 Glycine max
Glyma.08G137300 5.0kb upstream 5.0kb upstream 7630 true Chr08: 10490440-10498069 Glycine max
Glyma.08G137300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10490440-10495439 Glycine max
Glyma.08G137300 5.0kb downstream 5.0kb downstream 7630 true Chr08: 10495440-10503069 Glycine max
Glyma.08G137300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10498070-10503069 Glycine max
Glyma.08G137300 10.0kb upstream 10.0kb upstream 12630 true Chr08: 10485440-10498069 Glycine max
Glyma.08G137300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10485440-10495439 Glycine max
Glyma.08G137300 10.0kb downstream 10.0kb downstream 12630 true Chr08: 10495440-10508069 Glycine max
Glyma.08G137300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10498070-10508069 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311047 5265 Fabidae View MSA
124069975 5270 Rosid View MSA
123750267 5271 Pentapetalae View MSA
122794981 5272 Eudicot View MSA
122048174 5273 Angiosperm View MSA
121350948 5274 Embryophyte View MSA
123381944 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.18295 0.0 6.80158    
cufflinks 1.40377 0.0 4.6443    
cufflinks 6.19426 0.0 17.0189    
cufflinks 4.57251 0.0 12.8941    
cufflinks 4.56532 0.0 12.8951    
cufflinks 5.40197 0.0 15.0043    
cufflinks 0.00801234 0.0 0.0366982 Low Low
cufflinks 3.12858 0.0 9.20882    
cufflinks 7.18727 0.0 19.5276    
cufflinks 0.724       Low
cufflinks 1.279        
cufflinks 3.92       High
cufflinks 2.414        
cufflinks 0.323       Low
cufflinks 3.857       High
cufflinks 1.241        
cufflinks 2.542        
cufflinks 1.365        
cufflinks 1.326        
cufflinks 1.047        
cufflinks 0.776        
cufflinks 1.112        
cufflinks 1.165        
cufflinks 1.536        
cufflinks 1.212        
cufflinks 2.055        

0 Strain