Gene : Glyma.08G138300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10551//PTHR10551:SF13 - FASCIN Genomic Order:  1383
Name:  ? Glyma.08G138300 Secondary Identifier:  ? PAC:30539228
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G138300 0.5kb upstream 0.5kb upstream 3303 true Chr08: 10603551-10606853 Glycine max
Glyma.08G138300 0.5kb upstream 0.5kb upstream 500 false Chr08: 10606354-10606853 Glycine max
Glyma.08G138300 0.5kb downstream 0.5kb downstream 3303 true Chr08: 10603051-10606353 Glycine max
Glyma.08G138300 0.5kb downstream 0.5kb downstream 500 false Chr08: 10603051-10603550 Glycine max
Glyma.08G138300 1.0kb upstream 1.0kb upstream 3803 true Chr08: 10603551-10607353 Glycine max
Glyma.08G138300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10606354-10607353 Glycine max
Glyma.08G138300 1.0kb downstream 1.0kb downstream 3803 true Chr08: 10602551-10606353 Glycine max
Glyma.08G138300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10602551-10603550 Glycine max
Glyma.08G138300 2.0kb upstream 2.0kb upstream 4803 true Chr08: 10603551-10608353 Glycine max
Glyma.08G138300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10606354-10608353 Glycine max
Glyma.08G138300 2.0kb downstream 2.0kb downstream 4803 true Chr08: 10601551-10606353 Glycine max
Glyma.08G138300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10601551-10603550 Glycine max
Glyma.08G138300 5.0kb upstream 5.0kb upstream 7803 true Chr08: 10603551-10611353 Glycine max
Glyma.08G138300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10606354-10611353 Glycine max
Glyma.08G138300 5.0kb downstream 5.0kb downstream 7803 true Chr08: 10598551-10606353 Glycine max
Glyma.08G138300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10598551-10603550 Glycine max
Glyma.08G138300 10.0kb upstream 10.0kb upstream 12803 true Chr08: 10603551-10616353 Glycine max
Glyma.08G138300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10606354-10616353 Glycine max
Glyma.08G138300 10.0kb downstream 10.0kb downstream 12803 true Chr08: 10593551-10606353 Glycine max
Glyma.08G138300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10593551-10603550 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313433 5265 Fabidae View MSA
124070042 5270 Rosid View MSA
123746465 5271 Pentapetalae View MSA
122796777 5272 Eudicot View MSA
122048839 5273 Angiosperm View MSA
121348630 5274 Embryophyte View MSA
123380948 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.966763 0.0 4.18937    
cufflinks 0.965489 0.0 4.24519    
cufflinks 1.1427 0.0 4.79927    
cufflinks 15.2133 0.0 54.206    
cufflinks 0.783148 0.0 3.49307    
cufflinks 0.0664089 0.0 0.267064 Low Low
cufflinks 90.6699 0.0 363.138 High High
cufflinks 26.2728 0.0 91.7924 High High
cufflinks 2.35125 0.0 7.9837    
cufflinks 1.602       High
cufflinks 0.06        
cufflinks 0.214        
cufflinks 0.244        
cufflinks 0.026     Low Low
cufflinks 0.051     Low Low
cufflinks 0.145        
cufflinks 1.196       High
cufflinks 0.249        
cufflinks 0.877       High
cufflinks 0.159        
cufflinks 0.161        
cufflinks 0.101        
cufflinks 0.051     Low Low
cufflinks 0.065        
cufflinks 0.113        
cufflinks 0.137        

0 Strain