Gene : Glyma.08G138700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON Genomic Order:  1387
Name:  ? Glyma.08G138700 Secondary Identifier:  ? PAC:30540704
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G138700 0.5kb upstream 0.5kb upstream 2272 true Chr08: 10625387-10627658 Glycine max
Glyma.08G138700 0.5kb upstream 0.5kb upstream 500 false Chr08: 10627159-10627658 Glycine max
Glyma.08G138700 0.5kb downstream 0.5kb downstream 2272 true Chr08: 10624887-10627158 Glycine max
Glyma.08G138700 0.5kb downstream 0.5kb downstream 500 false Chr08: 10624887-10625386 Glycine max
Glyma.08G138700 1.0kb upstream 1.0kb upstream 2772 true Chr08: 10625387-10628158 Glycine max
Glyma.08G138700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10627159-10628158 Glycine max
Glyma.08G138700 1.0kb downstream 1.0kb downstream 2772 true Chr08: 10624387-10627158 Glycine max
Glyma.08G138700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10624387-10625386 Glycine max
Glyma.08G138700 2.0kb upstream 2.0kb upstream 3772 true Chr08: 10625387-10629158 Glycine max
Glyma.08G138700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10627159-10629158 Glycine max
Glyma.08G138700 2.0kb downstream 2.0kb downstream 3772 true Chr08: 10623387-10627158 Glycine max
Glyma.08G138700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10623387-10625386 Glycine max
Glyma.08G138700 5.0kb upstream 5.0kb upstream 6772 true Chr08: 10625387-10632158 Glycine max
Glyma.08G138700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10627159-10632158 Glycine max
Glyma.08G138700 5.0kb downstream 5.0kb downstream 6772 true Chr08: 10620387-10627158 Glycine max
Glyma.08G138700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10620387-10625386 Glycine max
Glyma.08G138700 10.0kb upstream 10.0kb upstream 11772 true Chr08: 10625387-10637158 Glycine max
Glyma.08G138700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10627159-10637158 Glycine max
Glyma.08G138700 10.0kb downstream 10.0kb downstream 11772 true Chr08: 10615387-10627158 Glycine max
Glyma.08G138700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10615387-10625386 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029593 5273 Angiosperm View MSA
122306914 5265 Fabidae View MSA
124064323 5270 Rosid View MSA
123746006 5271 Pentapetalae View MSA
122790595 5272 Eudicot View MSA
121298906 5274 Embryophyte View MSA
123336848 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.223741 0.0 1.58044    
cufflinks 0.161818 0.0 0.634754 Low  
cufflinks 0.464098 0.0 2.26421    
cufflinks 0.210095 0.0 0.81526    
cufflinks 0.418327 0.0 2.06534    
cufflinks 0.363552 0.0 1.81282    
cufflinks 0.0261994 0.0 0.119218 Low Low
cufflinks 0.692402 0.0 3.18675    
cufflinks 0.749193 0.0 3.43836   High
cufflinks 0.913       High
cufflinks 0.397        
cufflinks 0.23        
cufflinks 0.975       High
cufflinks 0.247        
cufflinks 0.028     Low Low
cufflinks 0.208        
cufflinks 0.348        
cufflinks 0.462        
cufflinks 0.099     Low Low
cufflinks 0.217        
cufflinks 0.608        
cufflinks 0.277        
cufflinks 0.094     Low Low
cufflinks 0.246        
cufflinks 0.25        
cufflinks 0.648        

0 Strain