Gene : Glyma.08G139600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12460:SF4 - ENTH/VHS FAMILY PROTEIN Genomic Order:  1396
Name:  ? Glyma.08G139600 Secondary Identifier:  ? PAC:30536049
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G139600 0.5kb upstream 0.5kb upstream 5907 true Chr08: 10684540-10690446 Glycine max
Glyma.08G139600 0.5kb upstream 0.5kb upstream 500 false Chr08: 10684540-10685039 Glycine max
Glyma.08G139600 0.5kb downstream 0.5kb downstream 5907 true Chr08: 10685040-10690946 Glycine max
Glyma.08G139600 0.5kb downstream 0.5kb downstream 500 false Chr08: 10690447-10690946 Glycine max
Glyma.08G139600 1.0kb upstream 1.0kb upstream 6407 true Chr08: 10684040-10690446 Glycine max
Glyma.08G139600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10684040-10685039 Glycine max
Glyma.08G139600 1.0kb downstream 1.0kb downstream 6407 true Chr08: 10685040-10691446 Glycine max
Glyma.08G139600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10690447-10691446 Glycine max
Glyma.08G139600 2.0kb upstream 2.0kb upstream 7407 true Chr08: 10683040-10690446 Glycine max
Glyma.08G139600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10683040-10685039 Glycine max
Glyma.08G139600 2.0kb downstream 2.0kb downstream 7407 true Chr08: 10685040-10692446 Glycine max
Glyma.08G139600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10690447-10692446 Glycine max
Glyma.08G139600 5.0kb upstream 5.0kb upstream 10407 true Chr08: 10680040-10690446 Glycine max
Glyma.08G139600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10680040-10685039 Glycine max
Glyma.08G139600 5.0kb downstream 5.0kb downstream 10407 true Chr08: 10685040-10695446 Glycine max
Glyma.08G139600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10690447-10695446 Glycine max
Glyma.08G139600 10.0kb upstream 10.0kb upstream 15407 true Chr08: 10675040-10690446 Glycine max
Glyma.08G139600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10675040-10685039 Glycine max
Glyma.08G139600 10.0kb downstream 10.0kb downstream 15407 true Chr08: 10685040-10700446 Glycine max
Glyma.08G139600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10690447-10700446 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312278 5265 Fabidae View MSA
124070749 5270 Rosid View MSA
123742286 5271 Pentapetalae View MSA
122795416 5272 Eudicot View MSA
122049571 5273 Angiosperm View MSA
123428880 5275 Viridiplantae View MSA
121348039 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.90536 0.0 15.7307   High
cufflinks 3.07703 0.0 11.3183    
cufflinks 3.56645 0.0 14.5278   High
cufflinks 2.98003 0.0 11.084    
cufflinks 1.91509 0.0 8.4017   Low
cufflinks 2.48396 0.0 7.49364    
cufflinks 3.11415 0.0 11.6463    
cufflinks 2.59673 0.0 10.2331    
cufflinks 2.66211 0.0 10.2713    
cufflinks 0.438       Low
cufflinks 0.494        
cufflinks 0.748        
cufflinks 0.488        
cufflinks 0.513        
cufflinks 0.7        
cufflinks 0.726        
cufflinks 0.42       Low
cufflinks 0.703        
cufflinks 0.662        
cufflinks 0.822       High
cufflinks 0.483       Low
cufflinks 0.8       High
cufflinks 1.011       High
cufflinks 0.633        
cufflinks 0.703        
cufflinks 0.527        

0 Strain