Gene : Glyma.08G129600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11785:SF230 - CATIONIC AMINO ACID TRANSPORTER 1 Genomic Order:  1296
Name:  ? Glyma.08G129600 Secondary Identifier:  ? PAC:30539072
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G129600 0.5kb upstream 0.5kb upstream 4176 true Chr08: 9973588-9977763 Glycine max
Glyma.08G129600 0.5kb upstream 0.5kb upstream 500 false Chr08: 9977264-9977763 Glycine max
Glyma.08G129600 0.5kb downstream 0.5kb downstream 4176 true Chr08: 9973088-9977263 Glycine max
Glyma.08G129600 0.5kb downstream 0.5kb downstream 500 false Chr08: 9973088-9973587 Glycine max
Glyma.08G129600 1.0kb upstream 1.0kb upstream 4676 true Chr08: 9973588-9978263 Glycine max
Glyma.08G129600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9977264-9978263 Glycine max
Glyma.08G129600 1.0kb downstream 1.0kb downstream 4676 true Chr08: 9972588-9977263 Glycine max
Glyma.08G129600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9972588-9973587 Glycine max
Glyma.08G129600 2.0kb upstream 2.0kb upstream 5676 true Chr08: 9973588-9979263 Glycine max
Glyma.08G129600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9977264-9979263 Glycine max
Glyma.08G129600 2.0kb downstream 2.0kb downstream 5676 true Chr08: 9971588-9977263 Glycine max
Glyma.08G129600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9971588-9973587 Glycine max
Glyma.08G129600 5.0kb upstream 5.0kb upstream 8676 true Chr08: 9973588-9982263 Glycine max
Glyma.08G129600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9977264-9982263 Glycine max
Glyma.08G129600 5.0kb downstream 5.0kb downstream 8676 true Chr08: 9968588-9977263 Glycine max
Glyma.08G129600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9968588-9973587 Glycine max
Glyma.08G129600 10.0kb upstream 10.0kb upstream 13676 true Chr08: 9973588-9987263 Glycine max
Glyma.08G129600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9977264-9987263 Glycine max
Glyma.08G129600 10.0kb downstream 10.0kb downstream 13676 true Chr08: 9963588-9977263 Glycine max
Glyma.08G129600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9963588-9973587 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300353 5265 Fabidae View MSA
124062541 5270 Rosid View MSA
123753183 5271 Pentapetalae View MSA
122795315 5272 Eudicot View MSA
122045421 5273 Angiosperm View MSA
121350184 5274 Embryophyte View MSA
123428616 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.56695 0.0 13.2891    
cufflinks 1.89075 0.0 6.73958   Low
cufflinks 33.0118 0.0 120.744 High High
cufflinks 16.5095 0.0 62.553    
cufflinks 9.26205 0.0 36.1985    
cufflinks 44.031 0.0 173.344 High High
cufflinks 1.66963 0.0 9.35829   Low
cufflinks 4.63927 0.0 16.2729    
cufflinks 8.34716 0.0 29.7423    
cufflinks 0.498        
cufflinks 4.108       High
cufflinks 2.388        
cufflinks 2.343        
cufflinks 1.912        
cufflinks 0.776        
cufflinks 0.097     Low Low
cufflinks 1.94        
cufflinks 1.013        
cufflinks 0.388        
cufflinks 0.108       Low
cufflinks 6.914     High High
cufflinks 0.133       Low
cufflinks 0.146       Low
cufflinks 5.415       High
cufflinks 0.093     Low Low
cufflinks 3.572        

0 Strain