Gene : Glyma.08G132800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24326:SF196 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-16-RELATED Genomic Order:  1328
Name:  ? Glyma.08G132800 Secondary Identifier:  ? PAC:30537113
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G132800 0.5kb upstream 0.5kb upstream 2761 true Chr08: 10180449-10183209 Glycine max
Glyma.08G132800 0.5kb upstream 0.5kb upstream 500 false Chr08: 10180449-10180948 Glycine max
Glyma.08G132800 0.5kb downstream 0.5kb downstream 2761 true Chr08: 10180949-10183709 Glycine max
Glyma.08G132800 0.5kb downstream 0.5kb downstream 500 false Chr08: 10183210-10183709 Glycine max
Glyma.08G132800 1.0kb upstream 1.0kb upstream 3261 true Chr08: 10179949-10183209 Glycine max
Glyma.08G132800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10179949-10180948 Glycine max
Glyma.08G132800 1.0kb downstream 1.0kb downstream 3261 true Chr08: 10180949-10184209 Glycine max
Glyma.08G132800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10183210-10184209 Glycine max
Glyma.08G132800 2.0kb upstream 2.0kb upstream 4261 true Chr08: 10178949-10183209 Glycine max
Glyma.08G132800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10178949-10180948 Glycine max
Glyma.08G132800 2.0kb downstream 2.0kb downstream 4261 true Chr08: 10180949-10185209 Glycine max
Glyma.08G132800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10183210-10185209 Glycine max
Glyma.08G132800 5.0kb upstream 5.0kb upstream 7261 true Chr08: 10175949-10183209 Glycine max
Glyma.08G132800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10175949-10180948 Glycine max
Glyma.08G132800 5.0kb downstream 5.0kb downstream 7261 true Chr08: 10180949-10188209 Glycine max
Glyma.08G132800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10183210-10188209 Glycine max
Glyma.08G132800 10.0kb upstream 10.0kb upstream 12261 true Chr08: 10170949-10183209 Glycine max
Glyma.08G132800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10170949-10180948 Glycine max
Glyma.08G132800 10.0kb downstream 10.0kb downstream 12261 true Chr08: 10180949-10193209 Glycine max
Glyma.08G132800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10183210-10193209 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309913 5265 Fabidae View MSA
124072423 5270 Rosid View MSA
123750844 5271 Pentapetalae View MSA
122791201 5272 Eudicot View MSA
122049195 5273 Angiosperm View MSA
121351579 5274 Embryophyte View MSA
123382235 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 82.4789 0.0 342.598 High  
cufflinks 141.361 0.0 753.013 High High
cufflinks 55.8632 0.0 199.469 High Low
cufflinks 84.3891 0.0 351.832 High  
cufflinks 106.149 0.0 491.668 High  
cufflinks 136.923 0.0 720.477 High High
cufflinks 65.0545 0.0 245.535 High Low
cufflinks 124.993 0.0 631.035 High  
cufflinks 99.1657 0.0 444.09 High  
cufflinks 39.965     High  
cufflinks 9.176     High Low
cufflinks 50.607     High  
cufflinks 43.544     High  
cufflinks 26.921     High  
cufflinks 17.357     High Low
cufflinks 45.587     High  
cufflinks 22.373     High  
cufflinks 50.793     High  
cufflinks 74.505     High High
cufflinks 32.695     High  
cufflinks 23.608     High  
cufflinks 50.127     High  
cufflinks 54.296     High  
cufflinks 14.691     High Low
cufflinks 38.307     High  
cufflinks 37.307     High  

0 Strain