Gene : Glyma.08G133400 G. max Wm82.a2.v1
Defline:  (1 of 4) PF12070 - Protein of unknown function (DUF3550/UPF0682) (DUF3550) Genomic Order:  1334
Name:  ? Glyma.08G133400 Secondary Identifier:  ? PAC:30539219
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G133400 0.5kb upstream 0.5kb upstream 6418 true Chr08: 10236155-10242572 Glycine max
Glyma.08G133400 0.5kb upstream 0.5kb upstream 500 false Chr08: 10236155-10236654 Glycine max
Glyma.08G133400 0.5kb downstream 0.5kb downstream 6418 true Chr08: 10236655-10243072 Glycine max
Glyma.08G133400 0.5kb downstream 0.5kb downstream 500 false Chr08: 10242573-10243072 Glycine max
Glyma.08G133400 1.0kb upstream 1.0kb upstream 6918 true Chr08: 10235655-10242572 Glycine max
Glyma.08G133400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 10235655-10236654 Glycine max
Glyma.08G133400 1.0kb downstream 1.0kb downstream 6918 true Chr08: 10236655-10243572 Glycine max
Glyma.08G133400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 10242573-10243572 Glycine max
Glyma.08G133400 2.0kb upstream 2.0kb upstream 7918 true Chr08: 10234655-10242572 Glycine max
Glyma.08G133400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 10234655-10236654 Glycine max
Glyma.08G133400 2.0kb downstream 2.0kb downstream 7918 true Chr08: 10236655-10244572 Glycine max
Glyma.08G133400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 10242573-10244572 Glycine max
Glyma.08G133400 5.0kb upstream 5.0kb upstream 10918 true Chr08: 10231655-10242572 Glycine max
Glyma.08G133400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 10231655-10236654 Glycine max
Glyma.08G133400 5.0kb downstream 5.0kb downstream 10918 true Chr08: 10236655-10247572 Glycine max
Glyma.08G133400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 10242573-10247572 Glycine max
Glyma.08G133400 10.0kb upstream 10.0kb upstream 15918 true Chr08: 10226655-10242572 Glycine max
Glyma.08G133400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 10226655-10236654 Glycine max
Glyma.08G133400 10.0kb downstream 10.0kb downstream 15918 true Chr08: 10236655-10252572 Glycine max
Glyma.08G133400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 10242573-10252572 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299201 5265 Fabidae View MSA
124066790 5270 Rosid View MSA
123739953 5271 Pentapetalae View MSA
122791908 5272 Eudicot View MSA
122047130 5273 Angiosperm View MSA
121349803 5274 Embryophyte View MSA
123425537 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.06946 0.0 11.5543    
cufflinks 3.69508 0.0 10.6181    
cufflinks 2.6827 0.0 8.03841   Low
cufflinks 5.80821 0.0 15.9474   High
cufflinks 4.43829 0.0 12.4587    
cufflinks 6.79991 0.0 18.4613   High
cufflinks 4.23701 0.0 11.9763    
cufflinks 4.73047 0.0 13.2264    
cufflinks 4.06417 0.0 11.5258    
cufflinks 2.787       High
cufflinks 1.13       Low
cufflinks 1.964        
cufflinks 2.677        
cufflinks 2.247        
cufflinks 1.383        
cufflinks 1.764        
cufflinks 3.6       High
cufflinks 2.707        
cufflinks 2.496        
cufflinks 1.405        
cufflinks 0.919       Low
cufflinks 1.682        
cufflinks 2.06        
cufflinks 0.997       Low
cufflinks 1.621        
cufflinks 2.274        

0 Strain