Gene : Glyma.08G126100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR30239:SF3 - ACETOLACTATE SYNTHASE SMALL SUBUNIT 2, CHLOROPLASTIC Genomic Order:  1261
Name:  ? Glyma.08G126100 Secondary Identifier:  ? PAC:30537381
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax BRANCHED-CHAIN-AA-SYN-PWY Glycine max pathologic  
Gmax ILEUSYN-PWY Glycine max pathologic  
Gmax PWY-3001 Glycine max pathologic  
Gmax VALSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G126100 0.5kb upstream 0.5kb upstream 7689 true Chr08: 9708470-9716158 Glycine max
Glyma.08G126100 0.5kb upstream 0.5kb upstream 500 false Chr08: 9708470-9708969 Glycine max
Glyma.08G126100 0.5kb downstream 0.5kb downstream 7689 true Chr08: 9708970-9716658 Glycine max
Glyma.08G126100 0.5kb downstream 0.5kb downstream 500 false Chr08: 9716159-9716658 Glycine max
Glyma.08G126100 1.0kb upstream 1.0kb upstream 8189 true Chr08: 9707970-9716158 Glycine max
Glyma.08G126100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 9707970-9708969 Glycine max
Glyma.08G126100 1.0kb downstream 1.0kb downstream 8189 true Chr08: 9708970-9717158 Glycine max
Glyma.08G126100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 9716159-9717158 Glycine max
Glyma.08G126100 2.0kb upstream 2.0kb upstream 9189 true Chr08: 9706970-9716158 Glycine max
Glyma.08G126100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 9706970-9708969 Glycine max
Glyma.08G126100 2.0kb downstream 2.0kb downstream 9189 true Chr08: 9708970-9718158 Glycine max
Glyma.08G126100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 9716159-9718158 Glycine max
Glyma.08G126100 5.0kb upstream 5.0kb upstream 12189 true Chr08: 9703970-9716158 Glycine max
Glyma.08G126100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 9703970-9708969 Glycine max
Glyma.08G126100 5.0kb downstream 5.0kb downstream 12189 true Chr08: 9708970-9721158 Glycine max
Glyma.08G126100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 9716159-9721158 Glycine max
Glyma.08G126100 10.0kb upstream 10.0kb upstream 17189 true Chr08: 9698970-9716158 Glycine max
Glyma.08G126100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 9698970-9708969 Glycine max
Glyma.08G126100 10.0kb downstream 10.0kb downstream 17189 true Chr08: 9708970-9726158 Glycine max
Glyma.08G126100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 9716159-9726158 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041401 5273 Angiosperm View MSA
122300213 5265 Fabidae View MSA
124071957 5270 Rosid View MSA
123740073 5271 Pentapetalae View MSA
122796860 5272 Eudicot View MSA
121347297 5274 Embryophyte View MSA
123426079 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.0729 0.0 61.799 High High
cufflinks 14.5589 0.0 38.9195    
cufflinks 7.14472 0.0 19.8717   Low
cufflinks 16.3026 0.0 43.5069    
cufflinks 13.7822 0.0 36.86    
cufflinks 4.76434 0.0 13.834   Low
cufflinks 22.7163 0.0 60.8257 High High
cufflinks 14.3479 0.0 38.3593    
cufflinks 8.60736 0.0 23.5476    
cufflinks 3.37        
cufflinks 0.257       Low
cufflinks 2.532        
cufflinks 3.055        
cufflinks 3.947        
cufflinks 0.628       Low
cufflinks 3.067        
cufflinks 1.162        
cufflinks 2.195        
cufflinks 3.768        
cufflinks 2.574        
cufflinks 0.53       Low
cufflinks 2.595        
cufflinks 3.79        
cufflinks 0.295       Low
cufflinks 2.865        
cufflinks 0.891        

0 Strain