Gene : Glyma.08G167600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11599:SF16 - PROTEASOME SUBUNIT ALPHA TYPE-2 Genomic Order:  1676
Name:  ? Glyma.08G167600 Secondary Identifier:  ? PAC:30539362
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G167600 0.5kb upstream 0.5kb upstream 8140 true Chr08: 13209680-13217819 Glycine max
Glyma.08G167600 0.5kb upstream 0.5kb upstream 500 false Chr08: 13209680-13210179 Glycine max
Glyma.08G167600 0.5kb downstream 0.5kb downstream 8140 true Chr08: 13210180-13218319 Glycine max
Glyma.08G167600 0.5kb downstream 0.5kb downstream 500 false Chr08: 13217820-13218319 Glycine max
Glyma.08G167600 1.0kb upstream 1.0kb upstream 8640 true Chr08: 13209180-13217819 Glycine max
Glyma.08G167600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13209180-13210179 Glycine max
Glyma.08G167600 1.0kb downstream 1.0kb downstream 8640 true Chr08: 13210180-13218819 Glycine max
Glyma.08G167600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13217820-13218819 Glycine max
Glyma.08G167600 2.0kb upstream 2.0kb upstream 9640 true Chr08: 13208180-13217819 Glycine max
Glyma.08G167600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13208180-13210179 Glycine max
Glyma.08G167600 2.0kb downstream 2.0kb downstream 9640 true Chr08: 13210180-13219819 Glycine max
Glyma.08G167600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13217820-13219819 Glycine max
Glyma.08G167600 5.0kb upstream 5.0kb upstream 12640 true Chr08: 13205180-13217819 Glycine max
Glyma.08G167600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13205180-13210179 Glycine max
Glyma.08G167600 5.0kb downstream 5.0kb downstream 12640 true Chr08: 13210180-13222819 Glycine max
Glyma.08G167600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13217820-13222819 Glycine max
Glyma.08G167600 10.0kb upstream 10.0kb upstream 17640 true Chr08: 13200180-13217819 Glycine max
Glyma.08G167600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13200180-13210179 Glycine max
Glyma.08G167600 10.0kb downstream 10.0kb downstream 17640 true Chr08: 13210180-13227819 Glycine max
Glyma.08G167600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13217820-13227819 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026291 5273 Angiosperm View MSA
122310573 5265 Fabidae View MSA
124069190 5270 Rosid View MSA
123746972 5271 Pentapetalae View MSA
122795211 5272 Eudicot View MSA
121350421 5274 Embryophyte View MSA
123426464 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.7055 0.0 251.774 High Low
cufflinks 67.9166 0.0 341.256 High  
cufflinks 52.2215 0.0 241.88 High Low
cufflinks 60.7311 0.0 275.38 High  
cufflinks 80.5556 0.0 413.48 High  
cufflinks 92.7609 0.0 507.768 High High
cufflinks 54.9412 0.0 257.545 High  
cufflinks 81.1643 0.0 397.008 High  
cufflinks 71.7139 0.0 338.806 High  
cufflinks 1.565        
cufflinks 1.053        
cufflinks 1.124        
cufflinks 2.468       High
cufflinks 2.778       High
cufflinks 0.714       Low
cufflinks 1.315        
cufflinks 0.873       Low
cufflinks 1.328        
cufflinks 1.412        
cufflinks 1.227        
cufflinks 1.036        
cufflinks 1.324        
cufflinks 1.334        
cufflinks 1.141        
cufflinks 1.294        
cufflinks 1.461        

0 Strain