Gene : Glyma.08G168200 G. max Wm82.a2.v1
Defline:  (1 of 2) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) Genomic Order:  1682
Name:  ? Glyma.08G168200 Secondary Identifier:  ? PAC:30537427
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G168200 0.5kb upstream 0.5kb upstream 4788 true Chr08: 13265903-13270690 Glycine max
Glyma.08G168200 0.5kb upstream 0.5kb upstream 500 false Chr08: 13270191-13270690 Glycine max
Glyma.08G168200 0.5kb downstream 0.5kb downstream 4788 true Chr08: 13265403-13270190 Glycine max
Glyma.08G168200 0.5kb downstream 0.5kb downstream 500 false Chr08: 13265403-13265902 Glycine max
Glyma.08G168200 1.0kb upstream 1.0kb upstream 5288 true Chr08: 13265903-13271190 Glycine max
Glyma.08G168200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13270191-13271190 Glycine max
Glyma.08G168200 1.0kb downstream 1.0kb downstream 5288 true Chr08: 13264903-13270190 Glycine max
Glyma.08G168200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13264903-13265902 Glycine max
Glyma.08G168200 2.0kb upstream 2.0kb upstream 6288 true Chr08: 13265903-13272190 Glycine max
Glyma.08G168200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13270191-13272190 Glycine max
Glyma.08G168200 2.0kb downstream 2.0kb downstream 6288 true Chr08: 13263903-13270190 Glycine max
Glyma.08G168200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13263903-13265902 Glycine max
Glyma.08G168200 5.0kb upstream 5.0kb upstream 9288 true Chr08: 13265903-13275190 Glycine max
Glyma.08G168200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13270191-13275190 Glycine max
Glyma.08G168200 5.0kb downstream 5.0kb downstream 9288 true Chr08: 13260903-13270190 Glycine max
Glyma.08G168200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13260903-13265902 Glycine max
Glyma.08G168200 10.0kb upstream 10.0kb upstream 14288 true Chr08: 13265903-13280190 Glycine max
Glyma.08G168200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13270191-13280190 Glycine max
Glyma.08G168200 10.0kb downstream 10.0kb downstream 14288 true Chr08: 13255903-13270190 Glycine max
Glyma.08G168200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13255903-13265902 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029747 5273 Angiosperm View MSA
122314148 5265 Fabidae View MSA
124062701 5270 Rosid View MSA
123752540 5271 Pentapetalae View MSA
122796500 5272 Eudicot View MSA
121351277 5274 Embryophyte View MSA
123428084 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.1447 0.0 161.384 High  
cufflinks 50.811 0.0 139.552 High  
cufflinks 49.9551 0.0 137.181 High  
cufflinks 55.1395 0.0 152.681 High  
cufflinks 59.6171 0.0 165.851 High  
cufflinks 86.2789 0.0 250.726 High High
cufflinks 38.2624 0.0 103.114 High Low
cufflinks 85.8106 0.0 250.544 High High
cufflinks 62.7266 0.0 175.782 High  
cufflinks 16.322     High  
cufflinks 12.12     High  
cufflinks 13.749     High  
cufflinks 22.616     High High
cufflinks 22.95     High High
cufflinks 10.806     High  
cufflinks 10.456     High  
cufflinks 12.463     High  
cufflinks 14.397     High  
cufflinks 14.02     High  
cufflinks 7.707     High Low
cufflinks 12.443     High  
cufflinks 9.599     High  
cufflinks 11.064     High  
cufflinks 12.657     High  
cufflinks 9.264     High Low
cufflinks 12.264     High  

0 Strain