Gene : Glyma.08G168300 G. max Wm82.a2.v1
Defline:  (1 of 252) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  1683
Name:  ? Glyma.08G168300 Secondary Identifier:  ? PAC:30540494
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G168300 0.5kb upstream 0.5kb upstream 917 true Chr08: 13333388-13334304 Glycine max
Glyma.08G168300 0.5kb upstream 0.5kb upstream 500 false Chr08: 13333805-13334304 Glycine max
Glyma.08G168300 0.5kb downstream 0.5kb downstream 917 true Chr08: 13332888-13333804 Glycine max
Glyma.08G168300 0.5kb downstream 0.5kb downstream 500 false Chr08: 13332888-13333387 Glycine max
Glyma.08G168300 1.0kb upstream 1.0kb upstream 1417 true Chr08: 13333388-13334804 Glycine max
Glyma.08G168300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13333805-13334804 Glycine max
Glyma.08G168300 1.0kb downstream 1.0kb downstream 1417 true Chr08: 13332388-13333804 Glycine max
Glyma.08G168300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13332388-13333387 Glycine max
Glyma.08G168300 2.0kb upstream 2.0kb upstream 2417 true Chr08: 13333388-13335804 Glycine max
Glyma.08G168300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13333805-13335804 Glycine max
Glyma.08G168300 2.0kb downstream 2.0kb downstream 2417 true Chr08: 13331388-13333804 Glycine max
Glyma.08G168300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13331388-13333387 Glycine max
Glyma.08G168300 5.0kb upstream 5.0kb upstream 5417 true Chr08: 13333388-13338804 Glycine max
Glyma.08G168300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13333805-13338804 Glycine max
Glyma.08G168300 5.0kb downstream 5.0kb downstream 5417 true Chr08: 13328388-13333804 Glycine max
Glyma.08G168300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13328388-13333387 Glycine max
Glyma.08G168300 10.0kb upstream 10.0kb upstream 10417 true Chr08: 13333388-13343804 Glycine max
Glyma.08G168300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13333805-13343804 Glycine max
Glyma.08G168300 10.0kb downstream 10.0kb downstream 10417 true Chr08: 13323388-13333804 Glycine max
Glyma.08G168300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13323388-13333387 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309775 5265 Fabidae View MSA
124071169 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.44441 0.0 32.209    
cufflinks 4.52629 0.0 16.4218    
cufflinks 36.7604 0.0 106.712 High High
cufflinks 9.12529 0.0 31.3598    
cufflinks 8.18743 0.0 28.0451    
cufflinks 1.61071 0.0 6.14468   Low
cufflinks 1.36509 0.0 5.2324   Low
cufflinks 12.3381 0.0 40.7399    
cufflinks 10.3575 0.0 34.8521    
cufflinks 3.604        
cufflinks 14.834     High  
cufflinks 18.826     High High
cufflinks 1.513       Low
cufflinks 0.86       Low
cufflinks 12.141     High  
cufflinks 4.701        
cufflinks 10.908     High  
cufflinks 3.686        
cufflinks 4.166        
cufflinks 5.269        
cufflinks 26.07     High High
cufflinks 3.448        
cufflinks 1.901       Low
cufflinks 12.505     High  
cufflinks 3.107        
cufflinks 24.625     High High

0 Strain