Gene : Glyma.08G169800 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR23244//PTHR23244:SF276 - KELCH REPEAT DOMAIN Genomic Order:  1698
Name:  ? Glyma.08G169800 Secondary Identifier:  ? PAC:30537458
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G169800 0.5kb upstream 0.5kb upstream 2835 true Chr08: 13521748-13524582 Glycine max
Glyma.08G169800 0.5kb upstream 0.5kb upstream 500 false Chr08: 13524083-13524582 Glycine max
Glyma.08G169800 0.5kb downstream 0.5kb downstream 2835 true Chr08: 13521248-13524082 Glycine max
Glyma.08G169800 0.5kb downstream 0.5kb downstream 500 false Chr08: 13521248-13521747 Glycine max
Glyma.08G169800 1.0kb upstream 1.0kb upstream 3335 true Chr08: 13521748-13525082 Glycine max
Glyma.08G169800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13524083-13525082 Glycine max
Glyma.08G169800 1.0kb downstream 1.0kb downstream 3335 true Chr08: 13520748-13524082 Glycine max
Glyma.08G169800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13520748-13521747 Glycine max
Glyma.08G169800 2.0kb upstream 2.0kb upstream 4335 true Chr08: 13521748-13526082 Glycine max
Glyma.08G169800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13524083-13526082 Glycine max
Glyma.08G169800 2.0kb downstream 2.0kb downstream 4335 true Chr08: 13519748-13524082 Glycine max
Glyma.08G169800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13519748-13521747 Glycine max
Glyma.08G169800 5.0kb upstream 5.0kb upstream 7335 true Chr08: 13521748-13529082 Glycine max
Glyma.08G169800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13524083-13529082 Glycine max
Glyma.08G169800 5.0kb downstream 5.0kb downstream 7335 true Chr08: 13516748-13524082 Glycine max
Glyma.08G169800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13516748-13521747 Glycine max
Glyma.08G169800 10.0kb upstream 10.0kb upstream 12335 true Chr08: 13521748-13534082 Glycine max
Glyma.08G169800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13524083-13534082 Glycine max
Glyma.08G169800 10.0kb downstream 10.0kb downstream 12335 true Chr08: 13511748-13524082 Glycine max
Glyma.08G169800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13511748-13521747 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300224 5265 Fabidae View MSA
124067132 5270 Rosid View MSA
123738528 5271 Pentapetalae View MSA
122789841 5272 Eudicot View MSA
122043366 5273 Angiosperm View MSA
121347303 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.7003 0.0 16.3102   Low
cufflinks 30.2051 0.0 81.4839 High  
cufflinks 5.22568 0.0 15.1251   Low
cufflinks 25.6425 0.0 68.7601 High  
cufflinks 86.4897 0.0 262.259 High High
cufflinks 10.1535 0.0 27.5993    
cufflinks 16.3307 0.0 43.5991    
cufflinks 6.77412 0.0 19.0555    
cufflinks 119.007 0.0 381.697 High High
cufflinks 11.115     High  
cufflinks 7.811     High  
cufflinks 10.868     High  
cufflinks 8.289     High  
cufflinks 0.792       Low
cufflinks 91.834     High High
cufflinks 12.518     High  
cufflinks 45.663     High High
cufflinks 23.597     High  
cufflinks 21.597     High  
cufflinks 12.425     High  
cufflinks 16.165     High  
cufflinks 15.995     High  
cufflinks 24.041     High  
cufflinks 19.531     High  
cufflinks 10.415     High  
cufflinks 48.067     High High

0 Strain