Gene : Glyma.08G170200 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.4.1.142 - Chitobiosyldiphosphodolichol beta-mannosyltransferase / mannosyltransferase Genomic Order:  1702
Name:  ? Glyma.08G170200 Secondary Identifier:  ? PAC:30537853
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G170200 0.5kb upstream 0.5kb upstream 6327 true Chr08: 13539940-13546266 Glycine max
Glyma.08G170200 0.5kb upstream 0.5kb upstream 500 false Chr08: 13545767-13546266 Glycine max
Glyma.08G170200 0.5kb downstream 0.5kb downstream 6327 true Chr08: 13539440-13545766 Glycine max
Glyma.08G170200 0.5kb downstream 0.5kb downstream 500 false Chr08: 13539440-13539939 Glycine max
Glyma.08G170200 1.0kb upstream 1.0kb upstream 6827 true Chr08: 13539940-13546766 Glycine max
Glyma.08G170200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13545767-13546766 Glycine max
Glyma.08G170200 1.0kb downstream 1.0kb downstream 6827 true Chr08: 13538940-13545766 Glycine max
Glyma.08G170200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13538940-13539939 Glycine max
Glyma.08G170200 2.0kb upstream 2.0kb upstream 7827 true Chr08: 13539940-13547766 Glycine max
Glyma.08G170200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13545767-13547766 Glycine max
Glyma.08G170200 2.0kb downstream 2.0kb downstream 7827 true Chr08: 13537940-13545766 Glycine max
Glyma.08G170200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13537940-13539939 Glycine max
Glyma.08G170200 5.0kb upstream 5.0kb upstream 10827 true Chr08: 13539940-13550766 Glycine max
Glyma.08G170200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13545767-13550766 Glycine max
Glyma.08G170200 5.0kb downstream 5.0kb downstream 10827 true Chr08: 13534940-13545766 Glycine max
Glyma.08G170200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13534940-13539939 Glycine max
Glyma.08G170200 10.0kb upstream 10.0kb upstream 15827 true Chr08: 13539940-13555766 Glycine max
Glyma.08G170200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13545767-13555766 Glycine max
Glyma.08G170200 10.0kb downstream 10.0kb downstream 15827 true Chr08: 13529940-13545766 Glycine max
Glyma.08G170200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13529940-13539939 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304345 5265 Fabidae View MSA
124066723 5270 Rosid View MSA
123740447 5271 Pentapetalae View MSA
122785906 5272 Eudicot View MSA
122046211 5273 Angiosperm View MSA
123429023 5275 Viridiplantae View MSA
121347340 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.08509 0.0 12.3538    
cufflinks 3.10395 0.0 12.352    
cufflinks 4.44793 0.0 18.6928   High
cufflinks 3.14523 0.0 12.4373    
cufflinks 2.40444 0.0 10.4207   Low
cufflinks 2.76101 0.0 13.421    
cufflinks 3.78229 0.0 14.3071   High
cufflinks 2.88048 0.0 11.6732    
cufflinks 2.91116 0.0 11.8369    
cufflinks 0.402        
cufflinks 0.288       Low
cufflinks 0.559       High
cufflinks 0.346        
cufflinks 0.332        
cufflinks 0.346        
cufflinks 0.36        
cufflinks 0.329        
cufflinks 0.807       High
cufflinks 0.56       High
cufflinks 0.486        
cufflinks 0.216       Low
cufflinks 0.502        
cufflinks 0.437        
cufflinks 0.381        
cufflinks 0.462        
cufflinks 0.284       Low

0 Strain