Gene : Glyma.08G173400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31744:SF5 - NAC DOMAIN-CONTAINING PROTEIN 21/22-RELATED Genomic Order:  1734
Name:  ? Glyma.08G173400 Secondary Identifier:  ? PAC:30537599
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G173400 0.5kb upstream 0.5kb upstream 5291 true Chr08: 13802196-13807486 Glycine max
Glyma.08G173400 0.5kb upstream 0.5kb upstream 500 false Chr08: 13802196-13802695 Glycine max
Glyma.08G173400 0.5kb downstream 0.5kb downstream 5291 true Chr08: 13802696-13807986 Glycine max
Glyma.08G173400 0.5kb downstream 0.5kb downstream 500 false Chr08: 13807487-13807986 Glycine max
Glyma.08G173400 1.0kb upstream 1.0kb upstream 5791 true Chr08: 13801696-13807486 Glycine max
Glyma.08G173400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13801696-13802695 Glycine max
Glyma.08G173400 1.0kb downstream 1.0kb downstream 5791 true Chr08: 13802696-13808486 Glycine max
Glyma.08G173400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13807487-13808486 Glycine max
Glyma.08G173400 2.0kb upstream 2.0kb upstream 6791 true Chr08: 13800696-13807486 Glycine max
Glyma.08G173400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13800696-13802695 Glycine max
Glyma.08G173400 2.0kb downstream 2.0kb downstream 6791 true Chr08: 13802696-13809486 Glycine max
Glyma.08G173400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13807487-13809486 Glycine max
Glyma.08G173400 5.0kb upstream 5.0kb upstream 9791 true Chr08: 13797696-13807486 Glycine max
Glyma.08G173400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13797696-13802695 Glycine max
Glyma.08G173400 5.0kb downstream 5.0kb downstream 9791 true Chr08: 13802696-13812486 Glycine max
Glyma.08G173400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13807487-13812486 Glycine max
Glyma.08G173400 10.0kb upstream 10.0kb upstream 14791 true Chr08: 13792696-13807486 Glycine max
Glyma.08G173400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13792696-13802695 Glycine max
Glyma.08G173400 10.0kb downstream 10.0kb downstream 14791 true Chr08: 13802696-13817486 Glycine max
Glyma.08G173400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13807487-13817486 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308392 5265 Fabidae View MSA
124060777 5270 Rosid View MSA
123741654 5271 Pentapetalae View MSA
122770099 5272 Eudicot View MSA
122041899 5273 Angiosperm View MSA
121309900 5274 Embryophyte View MSA
123347534 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.1753 0.0 131.895 High  
cufflinks 1.48478 0.0 5.20204   Low
cufflinks 35.61 0.0 95.9767 High  
cufflinks 3.4935 0.0 11.0202    
cufflinks 26.5343 0.0 70.8203 High  
cufflinks 89.9473 0.0 263.811 High High
cufflinks 2.15447 0.0 7.26786   Low
cufflinks 6.46 0.0 18.7178    
cufflinks 43.0633 0.0 117.081 High  
cufflinks 0.294       Low
cufflinks 1.824        
cufflinks 5.302       High
cufflinks 2.706        
cufflinks 0.264       Low
cufflinks 0.978        
cufflinks 0.435        
cufflinks 2.488        
cufflinks 0.734        
cufflinks 0.38        
cufflinks 0.509        
cufflinks 2.178        
cufflinks 0.437        
cufflinks 0.621        
cufflinks 4.044       High
cufflinks 0.554        
cufflinks 3.499       High

0 Strain