Gene : Glyma.08G174100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR15835:SF6 - F20D23.9 PROTEIN Genomic Order:  1741
Name:  ? Glyma.08G174100 Secondary Identifier:  ? PAC:30540816
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G174100 0.5kb upstream 0.5kb upstream 7777 true Chr08: 13894726-13902502 Glycine max
Glyma.08G174100 0.5kb upstream 0.5kb upstream 500 false Chr08: 13902003-13902502 Glycine max
Glyma.08G174100 0.5kb downstream 0.5kb downstream 7777 true Chr08: 13894226-13902002 Glycine max
Glyma.08G174100 0.5kb downstream 0.5kb downstream 500 false Chr08: 13894226-13894725 Glycine max
Glyma.08G174100 1.0kb upstream 1.0kb upstream 8277 true Chr08: 13894726-13903002 Glycine max
Glyma.08G174100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13902003-13903002 Glycine max
Glyma.08G174100 1.0kb downstream 1.0kb downstream 8277 true Chr08: 13893726-13902002 Glycine max
Glyma.08G174100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13893726-13894725 Glycine max
Glyma.08G174100 2.0kb upstream 2.0kb upstream 9277 true Chr08: 13894726-13904002 Glycine max
Glyma.08G174100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13902003-13904002 Glycine max
Glyma.08G174100 2.0kb downstream 2.0kb downstream 9277 true Chr08: 13892726-13902002 Glycine max
Glyma.08G174100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13892726-13894725 Glycine max
Glyma.08G174100 5.0kb upstream 5.0kb upstream 12277 true Chr08: 13894726-13907002 Glycine max
Glyma.08G174100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13902003-13907002 Glycine max
Glyma.08G174100 5.0kb downstream 5.0kb downstream 12277 true Chr08: 13889726-13902002 Glycine max
Glyma.08G174100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13889726-13894725 Glycine max
Glyma.08G174100 10.0kb upstream 10.0kb upstream 17277 true Chr08: 13894726-13912002 Glycine max
Glyma.08G174100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13902003-13912002 Glycine max
Glyma.08G174100 10.0kb downstream 10.0kb downstream 17277 true Chr08: 13884726-13902002 Glycine max
Glyma.08G174100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13884726-13894725 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297172 5265 Fabidae View MSA
124065302 5270 Rosid View MSA
123751244 5271 Pentapetalae View MSA
122788021 5272 Eudicot View MSA
122045588 5273 Angiosperm View MSA
121349794 5274 Embryophyte View MSA
123428489 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.12487 0.0 30.3269    
cufflinks 5.67613 0.0 21.5727   Low
cufflinks 7.68007 0.0 28.5687    
cufflinks 6.47552 0.0 24.3687    
cufflinks 5.87003 0.0 22.3631    
cufflinks 9.89794 0.0 36.6949   High
cufflinks 6.87028 0.0 25.6793    
cufflinks 6.21141 0.0 23.4055    
cufflinks 6.87505 0.0 25.6164    
cufflinks 3.466       High
cufflinks 2.583        
cufflinks 1.786        
cufflinks 1.358       Low
cufflinks 0.951       Low
cufflinks 2.248        
cufflinks 1.614        
cufflinks 6.737     High High
cufflinks 1.71        
cufflinks 1.869        
cufflinks 1.635        
cufflinks 2.53        
cufflinks 1.684        
cufflinks 3.017        
cufflinks 2.656        
cufflinks 1.425        
cufflinks 3.284        

0 Strain