Gene : Glyma.08G162000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24031:SF303 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL Genomic Order:  1620
Name:  ? Glyma.08G162000 Secondary Identifier:  ? PAC:30539456
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G162000 0.5kb upstream 0.5kb upstream 2766 true Chr08: 12590707-12593472 Glycine max
Glyma.08G162000 0.5kb upstream 0.5kb upstream 500 false Chr08: 12590707-12591206 Glycine max
Glyma.08G162000 0.5kb downstream 0.5kb downstream 2766 true Chr08: 12591207-12593972 Glycine max
Glyma.08G162000 0.5kb downstream 0.5kb downstream 500 false Chr08: 12593473-12593972 Glycine max
Glyma.08G162000 1.0kb upstream 1.0kb upstream 3266 true Chr08: 12590207-12593472 Glycine max
Glyma.08G162000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12590207-12591206 Glycine max
Glyma.08G162000 1.0kb downstream 1.0kb downstream 3266 true Chr08: 12591207-12594472 Glycine max
Glyma.08G162000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12593473-12594472 Glycine max
Glyma.08G162000 2.0kb upstream 2.0kb upstream 4266 true Chr08: 12589207-12593472 Glycine max
Glyma.08G162000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12589207-12591206 Glycine max
Glyma.08G162000 2.0kb downstream 2.0kb downstream 4266 true Chr08: 12591207-12595472 Glycine max
Glyma.08G162000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12593473-12595472 Glycine max
Glyma.08G162000 5.0kb upstream 5.0kb upstream 7266 true Chr08: 12586207-12593472 Glycine max
Glyma.08G162000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12586207-12591206 Glycine max
Glyma.08G162000 5.0kb downstream 5.0kb downstream 7266 true Chr08: 12591207-12598472 Glycine max
Glyma.08G162000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12593473-12598472 Glycine max
Glyma.08G162000 10.0kb upstream 10.0kb upstream 12266 true Chr08: 12581207-12593472 Glycine max
Glyma.08G162000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12581207-12591206 Glycine max
Glyma.08G162000 10.0kb downstream 10.0kb downstream 12266 true Chr08: 12591207-12603472 Glycine max
Glyma.08G162000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12593473-12603472 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299913 5265 Fabidae View MSA
124066635 5270 Rosid View MSA
123739658 5271 Pentapetalae View MSA
122793354 5272 Eudicot View MSA
122045759 5273 Angiosperm View MSA
121346907 5274 Embryophyte View MSA
123426302 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.7094 0.0 61.5697 High High
cufflinks 14.7129 0.0 39.2757    
cufflinks 12.2012 0.0 32.5544    
cufflinks 8.33067 0.0 22.4481    
cufflinks 5.45742 0.0 15.126    
cufflinks 2.37578 0.0 7.28131   Low
cufflinks 9.30065 0.0 24.9555    
cufflinks 10.1875 0.0 27.2579    
cufflinks 4.35793 0.0 12.351    
cufflinks 7.756     High  
cufflinks 1.244       Low
cufflinks 13.928     High  
cufflinks 4.305        
cufflinks 5.013        
cufflinks 1.676       Low
cufflinks 16.906     High  
cufflinks 1.945        
cufflinks 12.377     High  
cufflinks 15.945     High  
cufflinks 27.205     High High
cufflinks 1.441       Low
cufflinks 23.99     High High
cufflinks 27.151     High High
cufflinks 1.089       Low
cufflinks 21.604     High High
cufflinks 0.978       Low

0 Strain