Gene : Glyma.08G163100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31989:SF9 - NAC DOMAIN CONTAINING PROTEIN 20-RELATED Genomic Order:  1631
Name:  ? Glyma.08G163100 Secondary Identifier:  ? PAC:30539848
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G163100 0.5kb upstream 0.5kb upstream 4874 true Chr08: 12785687-12790560 Glycine max
Glyma.08G163100 0.5kb upstream 0.5kb upstream 500 false Chr08: 12785687-12786186 Glycine max
Glyma.08G163100 0.5kb downstream 0.5kb downstream 4874 true Chr08: 12786187-12791060 Glycine max
Glyma.08G163100 0.5kb downstream 0.5kb downstream 500 false Chr08: 12790561-12791060 Glycine max
Glyma.08G163100 1.0kb upstream 1.0kb upstream 5374 true Chr08: 12785187-12790560 Glycine max
Glyma.08G163100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12785187-12786186 Glycine max
Glyma.08G163100 1.0kb downstream 1.0kb downstream 5374 true Chr08: 12786187-12791560 Glycine max
Glyma.08G163100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12790561-12791560 Glycine max
Glyma.08G163100 2.0kb upstream 2.0kb upstream 6374 true Chr08: 12784187-12790560 Glycine max
Glyma.08G163100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12784187-12786186 Glycine max
Glyma.08G163100 2.0kb downstream 2.0kb downstream 6374 true Chr08: 12786187-12792560 Glycine max
Glyma.08G163100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12790561-12792560 Glycine max
Glyma.08G163100 5.0kb upstream 5.0kb upstream 9374 true Chr08: 12781187-12790560 Glycine max
Glyma.08G163100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12781187-12786186 Glycine max
Glyma.08G163100 5.0kb downstream 5.0kb downstream 9374 true Chr08: 12786187-12795560 Glycine max
Glyma.08G163100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12790561-12795560 Glycine max
Glyma.08G163100 10.0kb upstream 10.0kb upstream 14374 true Chr08: 12776187-12790560 Glycine max
Glyma.08G163100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12776187-12786186 Glycine max
Glyma.08G163100 10.0kb downstream 10.0kb downstream 14374 true Chr08: 12786187-12800560 Glycine max
Glyma.08G163100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12790561-12800560 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304085 5265 Fabidae View MSA
124068910 5270 Rosid View MSA
123748777 5271 Pentapetalae View MSA
122796507 5272 Eudicot View MSA
122051475 5273 Angiosperm View MSA
121312510 5274 Embryophyte View MSA
123349677 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0705859 0.0 0.287553 Low  
cufflinks 0.257495 0.0 0.997198    
cufflinks 0.0924773 0.0 0.371485 Low  
cufflinks 0.103891 0.0 0.415947 Low  
cufflinks 0.515771 0.0 1.93811   High
cufflinks 0.0990025 0.0 0.39744 Low  
cufflinks 0.0522616 0.0 0.216775 Low Low
cufflinks 0.0943654 0.0 0.379225 Low  
cufflinks 0.23042 0.0 0.896614 Low  
cufflinks 0.024     Low Low
cufflinks 0.075        
cufflinks 0.073     Low  
cufflinks 0.23        
cufflinks 0.267        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.295        
cufflinks 0.036     Low Low
cufflinks 0.22        
cufflinks 0.071     Low  
cufflinks 0.542       High
cufflinks 0.077        
cufflinks 0.351        
cufflinks 0.367       High
cufflinks 0.035     Low Low
cufflinks 0.321        
cufflinks 0.136        

0 Strain