Gene : Glyma.08G163400 G. max Wm82.a2.v1
Defline:  (1 of 19) PF04788 - Protein of unknown function (DUF620) (DUF620) Genomic Order:  1634
Name:  ? Glyma.08G163400 Secondary Identifier:  ? PAC:30540294
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G163400 0.5kb upstream 0.5kb upstream 4064 true Chr08: 12830668-12834731 Glycine max
Glyma.08G163400 0.5kb upstream 0.5kb upstream 500 false Chr08: 12830668-12831167 Glycine max
Glyma.08G163400 0.5kb downstream 0.5kb downstream 4064 true Chr08: 12831168-12835231 Glycine max
Glyma.08G163400 0.5kb downstream 0.5kb downstream 500 false Chr08: 12834732-12835231 Glycine max
Glyma.08G163400 1.0kb upstream 1.0kb upstream 4564 true Chr08: 12830168-12834731 Glycine max
Glyma.08G163400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12830168-12831167 Glycine max
Glyma.08G163400 1.0kb downstream 1.0kb downstream 4564 true Chr08: 12831168-12835731 Glycine max
Glyma.08G163400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12834732-12835731 Glycine max
Glyma.08G163400 2.0kb upstream 2.0kb upstream 5564 true Chr08: 12829168-12834731 Glycine max
Glyma.08G163400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12829168-12831167 Glycine max
Glyma.08G163400 2.0kb downstream 2.0kb downstream 5564 true Chr08: 12831168-12836731 Glycine max
Glyma.08G163400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12834732-12836731 Glycine max
Glyma.08G163400 5.0kb upstream 5.0kb upstream 8564 true Chr08: 12826168-12834731 Glycine max
Glyma.08G163400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12826168-12831167 Glycine max
Glyma.08G163400 5.0kb downstream 5.0kb downstream 8564 true Chr08: 12831168-12839731 Glycine max
Glyma.08G163400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12834732-12839731 Glycine max
Glyma.08G163400 10.0kb upstream 10.0kb upstream 13564 true Chr08: 12821168-12834731 Glycine max
Glyma.08G163400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12821168-12831167 Glycine max
Glyma.08G163400 10.0kb downstream 10.0kb downstream 13564 true Chr08: 12831168-12844731 Glycine max
Glyma.08G163400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12834732-12844731 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301751 5265 Fabidae View MSA
124065577 5270 Rosid View MSA
123739517 5271 Pentapetalae View MSA
122769955 5272 Eudicot View MSA
122044240 5273 Angiosperm View MSA
121310259 5274 Embryophyte View MSA
123347798 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.28427 0.0 4.46655    
cufflinks 4.30504 0.0 12.8371    
cufflinks 0.39046 0.0 1.46444   Low
cufflinks 6.05163 0.0 17.2312   High
cufflinks 2.91618 0.0 9.14236    
cufflinks 0.713976 0.0 2.59165    
cufflinks 0.687878 0.0 2.50138    
cufflinks 8.15214 0.0 22.5318   High
cufflinks 2.88012 0.0 9.05243    
cufflinks 2.089        
cufflinks 0.049     Low Low
cufflinks 0.73        
cufflinks 1.202        
cufflinks 0.849        
cufflinks 0.017     Low Low
cufflinks 2.136        
cufflinks 0.302        
cufflinks 1.051        
cufflinks 1.13        
cufflinks 1.55        
cufflinks 0.192        
cufflinks 1.967        
cufflinks 2.766       High
cufflinks 0.134       Low
cufflinks 1.528        
cufflinks 0.344        

0 Strain