Gene : Glyma.08G163700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11699:SF49 - SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL Genomic Order:  1637
Name:  ? Glyma.08G163700 Secondary Identifier:  ? PAC:30536897
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLUDEG-I-PWY Glycine max pathologic  
Gmax PWY-4321 Glycine max pathologic  
Gmax PWY-6535 Glycine max pathologic  

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G163700 0.5kb upstream 0.5kb upstream 17081 true Chr08: 12875239-12892319 Glycine max
Glyma.08G163700 0.5kb upstream 0.5kb upstream 500 false Chr08: 12891820-12892319 Glycine max
Glyma.08G163700 0.5kb downstream 0.5kb downstream 17081 true Chr08: 12874739-12891819 Glycine max
Glyma.08G163700 0.5kb downstream 0.5kb downstream 500 false Chr08: 12874739-12875238 Glycine max
Glyma.08G163700 1.0kb upstream 1.0kb upstream 17581 true Chr08: 12875239-12892819 Glycine max
Glyma.08G163700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12891820-12892819 Glycine max
Glyma.08G163700 1.0kb downstream 1.0kb downstream 17581 true Chr08: 12874239-12891819 Glycine max
Glyma.08G163700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12874239-12875238 Glycine max
Glyma.08G163700 2.0kb upstream 2.0kb upstream 18581 true Chr08: 12875239-12893819 Glycine max
Glyma.08G163700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12891820-12893819 Glycine max
Glyma.08G163700 2.0kb downstream 2.0kb downstream 18581 true Chr08: 12873239-12891819 Glycine max
Glyma.08G163700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12873239-12875238 Glycine max
Glyma.08G163700 5.0kb upstream 5.0kb upstream 21581 true Chr08: 12875239-12896819 Glycine max
Glyma.08G163700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12891820-12896819 Glycine max
Glyma.08G163700 5.0kb downstream 5.0kb downstream 21581 true Chr08: 12870239-12891819 Glycine max
Glyma.08G163700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12870239-12875238 Glycine max
Glyma.08G163700 10.0kb upstream 10.0kb upstream 26581 true Chr08: 12875239-12901819 Glycine max
Glyma.08G163700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12891820-12901819 Glycine max
Glyma.08G163700 10.0kb downstream 10.0kb downstream 26581 true Chr08: 12865239-12891819 Glycine max
Glyma.08G163700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12865239-12875238 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303483 5265 Fabidae View MSA
124063190 5270 Rosid View MSA
123737868 5271 Pentapetalae View MSA
122769906 5272 Eudicot View MSA
122045886 5273 Angiosperm View MSA
121345720 5274 Embryophyte View MSA
123427690 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.4717 0.0 32.3228    
cufflinks 5.58752 0.0 28.098    
cufflinks 4.90802 0.0 19.8996   Low
cufflinks 9.53355 0.0 45.2616    
cufflinks 8.20195 0.0 33.4381    
cufflinks 6.48631 0.0 24.6289    
cufflinks 23.1929 0.0 112.918 High High
cufflinks 7.78602 0.0 35.0107    
cufflinks 11.5089 0.0 55.6123    
cufflinks 0.186        
cufflinks 0.155       Low
cufflinks 0.267       High
cufflinks 0.317       High
cufflinks 0.267       High
cufflinks 0.32       High
cufflinks 0.168        
cufflinks 0.137       Low
cufflinks 0.265       High
cufflinks 0.232        
cufflinks 0.19        
cufflinks 0.149       Low
cufflinks 0.199        
cufflinks 0.174        
cufflinks 0.178        
cufflinks 0.19        
cufflinks 0.185        

0 Strain