Gene : Glyma.08G163800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10926//PTHR10926:SF30 - CELL CYCLE CONTROL PROTEIN 50 Genomic Order:  1638
Name:  ? Glyma.08G163800 Secondary Identifier:  ? PAC:30536109
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G163800 0.5kb upstream 0.5kb upstream 5086 true Chr08: 12894707-12899792 Glycine max
Glyma.08G163800 0.5kb upstream 0.5kb upstream 500 false Chr08: 12894707-12895206 Glycine max
Glyma.08G163800 0.5kb downstream 0.5kb downstream 5086 true Chr08: 12895207-12900292 Glycine max
Glyma.08G163800 0.5kb downstream 0.5kb downstream 500 false Chr08: 12899793-12900292 Glycine max
Glyma.08G163800 1.0kb upstream 1.0kb upstream 5586 true Chr08: 12894207-12899792 Glycine max
Glyma.08G163800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12894207-12895206 Glycine max
Glyma.08G163800 1.0kb downstream 1.0kb downstream 5586 true Chr08: 12895207-12900792 Glycine max
Glyma.08G163800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12899793-12900792 Glycine max
Glyma.08G163800 2.0kb upstream 2.0kb upstream 6586 true Chr08: 12893207-12899792 Glycine max
Glyma.08G163800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12893207-12895206 Glycine max
Glyma.08G163800 2.0kb downstream 2.0kb downstream 6586 true Chr08: 12895207-12901792 Glycine max
Glyma.08G163800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12899793-12901792 Glycine max
Glyma.08G163800 5.0kb upstream 5.0kb upstream 9586 true Chr08: 12890207-12899792 Glycine max
Glyma.08G163800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12890207-12895206 Glycine max
Glyma.08G163800 5.0kb downstream 5.0kb downstream 9586 true Chr08: 12895207-12904792 Glycine max
Glyma.08G163800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12899793-12904792 Glycine max
Glyma.08G163800 10.0kb upstream 10.0kb upstream 14586 true Chr08: 12885207-12899792 Glycine max
Glyma.08G163800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12885207-12895206 Glycine max
Glyma.08G163800 10.0kb downstream 10.0kb downstream 14586 true Chr08: 12895207-12909792 Glycine max
Glyma.08G163800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12899793-12909792 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309724 5265 Fabidae View MSA
124071638 5270 Rosid View MSA
123747358 5271 Pentapetalae View MSA
122796482 5272 Eudicot View MSA
122050302 5273 Angiosperm View MSA
121349346 5274 Embryophyte View MSA
123425782 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0812 0.0 54.4384   Low
cufflinks 22.2194 0.0 73.4168 High  
cufflinks 31.8388 0.0 108.546 High  
cufflinks 30.7984 0.0 115.677 High  
cufflinks 16.1763 0.0 54.4683   Low
cufflinks 25.3962 0.0 85.9926 High  
cufflinks 41.6504 0.0 142.307 High High
cufflinks 21.2048 0.0 78.8361 High  
cufflinks 25.4656 0.0 94.1575 High  
cufflinks 2.239        
cufflinks 1.626        
cufflinks 3.399       High
cufflinks 1.971        
cufflinks 1.846        
cufflinks 2.349        
cufflinks 2.459        
cufflinks 0.982       Low
cufflinks 3.516       High
cufflinks 3.051       High
cufflinks 2.692        
cufflinks 1.788        
cufflinks 2.621        
cufflinks 2.388        
cufflinks 2.211        
cufflinks 2.64        
cufflinks 1.362       Low

0 Strain