Gene : Glyma.08G165100 G. max Wm82.a2.v1
Defline:  (1 of 1) PF01464 - Transglycosylase SLT domain (SLT) Genomic Order:  1651
Name:  ? Glyma.08G165100 Secondary Identifier:  ? PAC:30538060
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G165100 0.5kb upstream 0.5kb upstream 10061 true Chr08: 13008080-13018140 Glycine max
Glyma.08G165100 0.5kb upstream 0.5kb upstream 500 false Chr08: 13008080-13008579 Glycine max
Glyma.08G165100 0.5kb downstream 0.5kb downstream 10061 true Chr08: 13008580-13018640 Glycine max
Glyma.08G165100 0.5kb downstream 0.5kb downstream 500 false Chr08: 13018141-13018640 Glycine max
Glyma.08G165100 1.0kb upstream 1.0kb upstream 10561 true Chr08: 13007580-13018140 Glycine max
Glyma.08G165100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13007580-13008579 Glycine max
Glyma.08G165100 1.0kb downstream 1.0kb downstream 10561 true Chr08: 13008580-13019140 Glycine max
Glyma.08G165100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13018141-13019140 Glycine max
Glyma.08G165100 2.0kb upstream 2.0kb upstream 11561 true Chr08: 13006580-13018140 Glycine max
Glyma.08G165100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13006580-13008579 Glycine max
Glyma.08G165100 2.0kb downstream 2.0kb downstream 11561 true Chr08: 13008580-13020140 Glycine max
Glyma.08G165100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13018141-13020140 Glycine max
Glyma.08G165100 5.0kb upstream 5.0kb upstream 14561 true Chr08: 13003580-13018140 Glycine max
Glyma.08G165100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13003580-13008579 Glycine max
Glyma.08G165100 5.0kb downstream 5.0kb downstream 14561 true Chr08: 13008580-13023140 Glycine max
Glyma.08G165100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13018141-13023140 Glycine max
Glyma.08G165100 10.0kb upstream 10.0kb upstream 19561 true Chr08: 12998580-13018140 Glycine max
Glyma.08G165100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12998580-13008579 Glycine max
Glyma.08G165100 10.0kb downstream 10.0kb downstream 19561 true Chr08: 13008580-13028140 Glycine max
Glyma.08G165100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13018141-13028140 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026274 5273 Angiosperm View MSA
122309128 5265 Fabidae View MSA
124063364 5270 Rosid View MSA
123738114 5271 Pentapetalae View MSA
122789993 5272 Eudicot View MSA
121350872 5274 Embryophyte View MSA
123381917 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.013783 0.0 0.0623338 Low  
cufflinks 0.0132326 0.0 0.0600099 Low  
cufflinks 0.761217 0.0 2.75584   High
cufflinks 0.0367284 0.0 0.152861 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0546056 0.0 0.222465 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.054     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.178       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain