Gene : Glyma.08G165500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11406:SF8 - PHOSPHOGLYCERATE KINASE 1, CHLOROPLASTIC-RELATED Genomic Order:  1655
Name:  ? Glyma.08G165500 Secondary Identifier:  ? PAC:30538332
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax CALVIN-PWY Glycine max pathologic  
Gmax GLUCONEO-PWY Glycine max pathologic  
Gmax PHOTOALL-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax SUCSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G165500 0.5kb upstream 0.5kb upstream 4255 true Chr08: 13045520-13049774 Glycine max
Glyma.08G165500 0.5kb upstream 0.5kb upstream 500 false Chr08: 13049275-13049774 Glycine max
Glyma.08G165500 0.5kb downstream 0.5kb downstream 4255 true Chr08: 13045020-13049274 Glycine max
Glyma.08G165500 0.5kb downstream 0.5kb downstream 500 false Chr08: 13045020-13045519 Glycine max
Glyma.08G165500 1.0kb upstream 1.0kb upstream 4755 true Chr08: 13045520-13050274 Glycine max
Glyma.08G165500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13049275-13050274 Glycine max
Glyma.08G165500 1.0kb downstream 1.0kb downstream 4755 true Chr08: 13044520-13049274 Glycine max
Glyma.08G165500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13044520-13045519 Glycine max
Glyma.08G165500 2.0kb upstream 2.0kb upstream 5755 true Chr08: 13045520-13051274 Glycine max
Glyma.08G165500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13049275-13051274 Glycine max
Glyma.08G165500 2.0kb downstream 2.0kb downstream 5755 true Chr08: 13043520-13049274 Glycine max
Glyma.08G165500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13043520-13045519 Glycine max
Glyma.08G165500 5.0kb upstream 5.0kb upstream 8755 true Chr08: 13045520-13054274 Glycine max
Glyma.08G165500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13049275-13054274 Glycine max
Glyma.08G165500 5.0kb downstream 5.0kb downstream 8755 true Chr08: 13040520-13049274 Glycine max
Glyma.08G165500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13040520-13045519 Glycine max
Glyma.08G165500 10.0kb upstream 10.0kb upstream 13755 true Chr08: 13045520-13059274 Glycine max
Glyma.08G165500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13049275-13059274 Glycine max
Glyma.08G165500 10.0kb downstream 10.0kb downstream 13755 true Chr08: 13035520-13049274 Glycine max
Glyma.08G165500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13035520-13045519 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308009 5265 Fabidae View MSA
124066937 5270 Rosid View MSA
123738509 5271 Pentapetalae View MSA
122793227 5272 Eudicot View MSA
122042825 5273 Angiosperm View MSA
121348563 5274 Embryophyte View MSA
123423936 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 143.294 0.0 496.517 High High
cufflinks 79.0569 0.0 241.801 High  
cufflinks 23.69 0.0 63.6444 High  
cufflinks 61.7792 0.0 182.079 High  
cufflinks 27.5134 0.0 74.7424 High  
cufflinks 14.4595 0.0 38.5899   Low
cufflinks 169.487 0.0 616.148 High High
cufflinks 33.7918 0.0 92.9833 High  
cufflinks 20.9617 0.0 56.1698 High  
cufflinks 32.476     High  
cufflinks 2.314       Low
cufflinks 16.486     High  
cufflinks 5.514        
cufflinks 5.992        
cufflinks 4.29        
cufflinks 111.762     High High
cufflinks 2.554       Low
cufflinks 18.912     High  
cufflinks 36.558     High  
cufflinks 130.672     High High
cufflinks 3.062        
cufflinks 112.456     High High
cufflinks 70.117     High  
cufflinks 2.235       Low
cufflinks 122.469     High High
cufflinks 2.783       Low

0 Strain