Gene : Glyma.08G165900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23257:SF438 - F3O9.7 PROTEIN-RELATED Genomic Order:  1659
Name:  ? Glyma.08G165900 Secondary Identifier:  ? PAC:30536634
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G165900 0.5kb upstream 0.5kb upstream 9603 true Chr08: 13082696-13092298 Glycine max
Glyma.08G165900 0.5kb upstream 0.5kb upstream 500 false Chr08: 13091799-13092298 Glycine max
Glyma.08G165900 0.5kb downstream 0.5kb downstream 9603 true Chr08: 13082196-13091798 Glycine max
Glyma.08G165900 0.5kb downstream 0.5kb downstream 500 false Chr08: 13082196-13082695 Glycine max
Glyma.08G165900 1.0kb upstream 1.0kb upstream 10103 true Chr08: 13082696-13092798 Glycine max
Glyma.08G165900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 13091799-13092798 Glycine max
Glyma.08G165900 1.0kb downstream 1.0kb downstream 10103 true Chr08: 13081696-13091798 Glycine max
Glyma.08G165900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 13081696-13082695 Glycine max
Glyma.08G165900 2.0kb upstream 2.0kb upstream 11103 true Chr08: 13082696-13093798 Glycine max
Glyma.08G165900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 13091799-13093798 Glycine max
Glyma.08G165900 2.0kb downstream 2.0kb downstream 11103 true Chr08: 13080696-13091798 Glycine max
Glyma.08G165900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 13080696-13082695 Glycine max
Glyma.08G165900 5.0kb upstream 5.0kb upstream 14103 true Chr08: 13082696-13096798 Glycine max
Glyma.08G165900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 13091799-13096798 Glycine max
Glyma.08G165900 5.0kb downstream 5.0kb downstream 14103 true Chr08: 13077696-13091798 Glycine max
Glyma.08G165900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 13077696-13082695 Glycine max
Glyma.08G165900 10.0kb upstream 10.0kb upstream 19103 true Chr08: 13082696-13101798 Glycine max
Glyma.08G165900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 13091799-13101798 Glycine max
Glyma.08G165900 10.0kb downstream 10.0kb downstream 19103 true Chr08: 13072696-13091798 Glycine max
Glyma.08G165900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 13072696-13082695 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253801 5265 Fabidae View MSA
124066314 5270 Rosid View MSA
123749730 5271 Pentapetalae View MSA
122796699 5272 Eudicot View MSA
122043276 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350927 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.93792 0.0 30.8386    
cufflinks 7.69801 0.0 26.3428    
cufflinks 12.2288 0.0 38.1641   High
cufflinks 7.46219 0.0 25.5247    
cufflinks 9.45471 0.0 32.6735    
cufflinks 10.1344 0.0 35.4054    
cufflinks 4.67198 0.0 25.0761   Low
cufflinks 9.12356 0.0 37.4575    
cufflinks 9.07769 0.0 31.315    
cufflinks 1.771        
cufflinks 1.497        
cufflinks 1.657        
cufflinks 2.051       High
cufflinks 2.318       High
cufflinks 1.573        
cufflinks 1.441        
cufflinks 1.29       Low
cufflinks 2.067       High
cufflinks 1.642        
cufflinks 1.665        
cufflinks 1.694        
cufflinks 1.62        
cufflinks 1.41       Low
cufflinks 1.597        
cufflinks 1.393       Low
cufflinks 1.699        

0 Strain