Gene : Glyma.08G157400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12741:SF9 - CALLOSE SYNTHASE 1-RELATED Genomic Order:  1574
Name:  ? Glyma.08G157400 Secondary Identifier:  ? PAC:30538079
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6773 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G157400 0.5kb upstream 0.5kb upstream 31097 true Chr08: 12162921-12194017 Glycine max
Glyma.08G157400 0.5kb upstream 0.5kb upstream 500 false Chr08: 12193518-12194017 Glycine max
Glyma.08G157400 0.5kb downstream 0.5kb downstream 31097 true Chr08: 12162421-12193517 Glycine max
Glyma.08G157400 0.5kb downstream 0.5kb downstream 500 false Chr08: 12162421-12162920 Glycine max
Glyma.08G157400 1.0kb upstream 1.0kb upstream 31597 true Chr08: 12162921-12194517 Glycine max
Glyma.08G157400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12193518-12194517 Glycine max
Glyma.08G157400 1.0kb downstream 1.0kb downstream 31597 true Chr08: 12161921-12193517 Glycine max
Glyma.08G157400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12161921-12162920 Glycine max
Glyma.08G157400 2.0kb upstream 2.0kb upstream 32597 true Chr08: 12162921-12195517 Glycine max
Glyma.08G157400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12193518-12195517 Glycine max
Glyma.08G157400 2.0kb downstream 2.0kb downstream 32597 true Chr08: 12160921-12193517 Glycine max
Glyma.08G157400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12160921-12162920 Glycine max
Glyma.08G157400 5.0kb upstream 5.0kb upstream 35597 true Chr08: 12162921-12198517 Glycine max
Glyma.08G157400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12193518-12198517 Glycine max
Glyma.08G157400 5.0kb downstream 5.0kb downstream 35597 true Chr08: 12157921-12193517 Glycine max
Glyma.08G157400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12157921-12162920 Glycine max
Glyma.08G157400 10.0kb upstream 10.0kb upstream 40597 true Chr08: 12162921-12203517 Glycine max
Glyma.08G157400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12193518-12203517 Glycine max
Glyma.08G157400 10.0kb downstream 10.0kb downstream 40597 true Chr08: 12152921-12193517 Glycine max
Glyma.08G157400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12152921-12162920 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296508 5265 Fabidae View MSA
124072639 5270 Rosid View MSA
123745171 5271 Pentapetalae View MSA
122788947 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.88618 0.0 18.5042   High
cufflinks 2.06424 0.0 5.69792   Low
cufflinks 5.3427 0.0 14.2742    
cufflinks 2.69457 0.0 7.29859   Low
cufflinks 3.6622 0.0 9.80788    
cufflinks 5.15447 0.0 13.757    
cufflinks 4.36715 0.0 11.6571    
cufflinks 5.87491 0.0 15.7124    
cufflinks 5.2236 0.0 13.9431    
cufflinks 0.672       Low
cufflinks 1.382        
cufflinks 1.526        
cufflinks 1.588        
cufflinks 0.634       Low
cufflinks 0.598       Low
cufflinks 0.939        
cufflinks 2.683       High
cufflinks 1.183        
cufflinks 0.818        
cufflinks 0.966        
cufflinks 1.096        
cufflinks 1.269        
cufflinks 0.643       Low
cufflinks 1.85        
cufflinks 0.947        
cufflinks 3.238       High

0 Strain